ID A0A452RND6_URSAM Unreviewed; 1482 AA.
AC A0A452RND6;
DT 08-MAY-2019, integrated into UniProtKB/TrEMBL.
DT 08-MAY-2019, sequence version 1.
DT 24-JAN-2024, entry version 20.
DE SubName: Full=Polybromo 1 {ECO:0000313|Ensembl:ENSUAMP00000020688.1};
GN Name=PBRM1 {ECO:0000313|Ensembl:ENSUAMP00000020688.1};
OS Ursus americanus (American black bear) (Euarctos americanus).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus.
OX NCBI_TaxID=9643 {ECO:0000313|Ensembl:ENSUAMP00000020688.1, ECO:0000313|Proteomes:UP000291022};
RN [1] {ECO:0000313|Proteomes:UP000291022}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA Korstanje R., Srivastava A., Sarsani V.K., Sheehan S.M., Seger R.L.,
RA Barter M.E., Lindqvist C., Brody L.C., Mullikin J.C.;
RT "De novo assembly and RNA-Seq shows season-dependent expression and editing
RT in black bear kidneys.";
RL Submitted (JUN-2016) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSUAMP00000020688.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (SEP-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR Ensembl; ENSUAMT00000023127.1; ENSUAMP00000020688.1; ENSUAMG00000012214.1.
DR GeneTree; ENSGT00390000003017; -.
DR Proteomes; UP000291022; Unassembled WGS sequence.
DR GO; GO:0016586; C:RSC-type complex; IEA:InterPro.
DR GO; GO:0003682; F:chromatin binding; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006338; P:chromatin remodeling; IEA:InterPro.
DR CDD; cd04717; BAH_polybromo; 2.
DR CDD; cd05520; Bromo_polybromo_III; 1.
DR CDD; cd05518; Bromo_polybromo_IV; 1.
DR CDD; cd05515; Bromo_polybromo_V; 1.
DR CDD; cd05526; Bromo_polybromo_VI; 1.
DR CDD; cd21984; HMG-box_PB1; 1.
DR Gene3D; 2.30.30.490; -; 2.
DR Gene3D; 1.20.920.10; Bromodomain-like; 5.
DR InterPro; IPR001025; BAH_dom.
DR InterPro; IPR043151; BAH_sf.
DR InterPro; IPR001487; Bromodomain.
DR InterPro; IPR036427; Bromodomain-like_sf.
DR InterPro; IPR018359; Bromodomain_CS.
DR InterPro; IPR009071; HMG_box_dom.
DR InterPro; IPR036910; HMG_box_dom_sf.
DR InterPro; IPR037968; PBRM1_BD5.
DR InterPro; IPR037382; Rsc/polybromo.
DR PANTHER; PTHR16062:SF19; PROTEIN POLYBROMO-1; 1.
DR PANTHER; PTHR16062; SWI/SNF-RELATED; 1.
DR Pfam; PF01426; BAH; 2.
DR Pfam; PF00439; Bromodomain; 5.
DR Pfam; PF00505; HMG_box; 1.
DR PRINTS; PR00503; BROMODOMAIN.
DR SMART; SM00439; BAH; 2.
DR SMART; SM00297; BROMO; 5.
DR SMART; SM00398; HMG; 1.
DR SUPFAM; SSF47370; Bromodomain; 5.
DR SUPFAM; SSF47095; HMG-box; 1.
DR PROSITE; PS51038; BAH; 2.
DR PROSITE; PS00633; BROMODOMAIN_1; 3.
DR PROSITE; PS50014; BROMODOMAIN_2; 5.
DR PROSITE; PS50118; HMG_BOX_2; 1.
PE 4: Predicted;
KW Bromodomain {ECO:0000256|ARBA:ARBA00023117, ECO:0000256|PROSITE-
KW ProRule:PRU00035}; DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00267};
KW Nucleus {ECO:0000256|PROSITE-ProRule:PRU00267};
KW Reference proteome {ECO:0000313|Proteomes:UP000291022}.
FT DOMAIN 25..80
FT /note="Bromo"
FT /evidence="ECO:0000259|PROSITE:PS50014"
FT DOMAIN 178..248
FT /note="Bromo"
FT /evidence="ECO:0000259|PROSITE:PS50014"
FT DOMAIN 331..401
FT /note="Bromo"
FT /evidence="ECO:0000259|PROSITE:PS50014"
FT DOMAIN 469..539
FT /note="Bromo"
FT /evidence="ECO:0000259|PROSITE:PS50014"
FT DOMAIN 610..655
FT /note="Bromo"
FT /evidence="ECO:0000259|PROSITE:PS50014"
FT DOMAIN 749..867
FT /note="BAH"
FT /evidence="ECO:0000259|PROSITE:PS51038"
FT DOMAIN 949..1065
FT /note="BAH"
FT /evidence="ECO:0000259|PROSITE:PS51038"
FT DOMAIN 1172..1240
FT /note="HMG box"
FT /evidence="ECO:0000259|PROSITE:PS50118"
FT DNA_BIND 1172..1240
FT /note="HMG box"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00267"
FT REGION 695..734
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 899..926
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1147..1171
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1224..1253
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 695..726
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1482 AA; 169401 MW; A71BE4BCD70BF244 CRC64;
CQCASLFSHY LDTFSYLACL VFVFQQYPDY YAIIKEPIDL KTIAQRIQNG SYKSIHAMAK
DIDLLAKNAK TYNEPGSQVF KDANSIKKIF YMKKAEIEHH EMAKSSLRMS NKRTVQGGRL
SAITMALQYG SESEEDAALA AARYEEGESE AESITSFMDV SNPFYQLYDT VRSCRNNQGQ
LIAEPFFHLP SKKKYPDYYQ QIKMPISLQQ IRTKLKNQEY ETLDHLEGDL NLMFENAKRY
NVPSSAIYKR VLKLQQVMQA KKKELARRDD IEDGDSMISS ATSDAGSAKR KRNTLDSEML
GLRRLSSKKN IRKQRMKILF NVVLEAREPG SGRRLCDLFM VKPSKKDYPD YYKIILEPMD
LKIIEHNIRN DKYAGEEGMI EDMKLMFRNA RHYNEEGSQV YNDAHILEKL LKDKRKELGP
LPDDDDVASP KLKLSRKSGI SPKKSKYMTP MQQKLNEVYE AVKNYTDKRG RRLSAIFLRL
PSRSELPDYY LTIKKPMDME KIRSHMMANK YQDIDSMVED FVMMFNNACT YNEPESLIYK
DALVLHKVLL ETRRDLEGDE DSHVPNVTLL IQELIHNLFV SVMSHQDDEG RCYSDSLAEI
PAVDPNFPNK PPLTFDIIRK NVENNRYRRL DLFQEHMFEV LERARRMNRT DSEIYEDAVE
LQQFFIKIRD ELCKNGEILL SPALSYTTKH LHNDVEKEKK EKLPKELEED KLKREEEKRE
AEKSEDSSGA AGLSSLQRTY SQDCSFKNSM YHVGDYVYVE PAEASLQPHI VCIERLWEDS
AGEKWLYGCW FYRPNETFHL ATRKFLEKEV FKSDYYNKVP VSKILGKCVV MFVKEYFKLC
PENFRDEDVF VCESRYSAKT KSFKKIKLWT MPISSVRFVP RDVPLPVVRV ASVFANADKG
DDEKNTDNSE DSRTEDSFNL EKEKEDVPVE MSNGEPGCHY FEQLRYNDMW LKVGDCVFIK
SHGLVRPRVG RIEKVWVRDG AAYFYGPIFI HPEETEHEPT KMFYKKEVFL SNLEETCPMT
CILGKCAVLS FKDFLSCRPT EIPENDILLC ESRYNESDKQ MKKFKGLKRF SLSAKVVDDE
IYYFRKPIVP QKEPSPLLEK KIQLLEAKFA ELEGGDDDIE EMGEEDSEVI EPPSLPQLQT
PLASELDLMP YTPPQSTPKS AKGSAKKEGS KRKINMSGYI LFSSEMRAVI KAQHPDYSFG
ELSRLVGTEW RNLETAKKAE YEERAAKVAE QQERERAAQQ QQPSASPRAG TPVGALMGVV
PPPTPMGMLN QQLTPVAGMM GGYPPGLPPL QGPVDGLVSM GSMQPLHPGG PPPHHLPPGV
PGLPGIPPPG VMNQGVAPMV GTPAPGGSPY GQQVGVLGPP GQQAPPPYPG PHPAAPPVIQ
QPTTPMFVAP PPKTQRLLHS EAYLKYIEGL SAESNSISKW DQTLAARRRD VHLSKEQESR
LPSHWLKSKG AHTTMADALW RLRDLMLRDT LNIRQAYNLE NL
//