ID A0A452Y2V3_AEGTS Unreviewed; 986 AA.
AC A0A452Y2V3;
DT 08-MAY-2019, integrated into UniProtKB/TrEMBL.
DT 08-MAY-2019, sequence version 1.
DT 24-JAN-2024, entry version 24.
DE RecName: Full=DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00012418};
DE EC=2.7.7.6 {ECO:0000256|ARBA:ARBA00012418};
OS Aegilops tauschii subsp. strangulata (Goatgrass).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Triticodae; Triticeae; Triticinae; Aegilops.
OX NCBI_TaxID=200361 {ECO:0000313|EnsemblPlants:AET1Gv20266300.17, ECO:0000313|Proteomes:UP000015105};
RN [1] {ECO:0000313|Proteomes:UP000015105}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. AL8/78 {ECO:0000313|Proteomes:UP000015105};
RX PubMed=25035499; DOI=10.1126/science.1250092;
RG International Wheat Genome Sequencing Consortium,;
RA Marcussen T., Sandve S.R., Heier L., Spannagl M., Pfeifer M.,
RA Jakobsen K.S., Wulff B.B., Steuernagel B., Mayer K.F., Olsen O.A.;
RT "Ancient hybridizations among the ancestral genomes of bread wheat.";
RL Science 345:1250092-1250092(2014).
RN [2] {ECO:0000313|Proteomes:UP000015105}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. AL8/78 {ECO:0000313|Proteomes:UP000015105};
RX PubMed=29158546; DOI=10.1038/s41477-017-0067-8;
RA Zhao G., Zou C., Li K., Wang K., Li T., Gao L., Zhang X., Wang H., Yang Z.,
RA Liu X., Jiang W., Mao L., Kong X., Jiao Y., Jia J.;
RT "The Aegilops tauschii genome reveals multiple impacts of transposons.";
RL Nat. Plants 3:946-955(2017).
RN [3] {ECO:0000313|EnsemblPlants:AET1Gv20266300.17}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2019) to UniProtKB.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:14527, Rhea:RHEA-
CC COMP:17342, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:140395;
CC EC=2.7.7.6; Evidence={ECO:0000256|ARBA:ARBA00024550};
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DR AlphaFoldDB; A0A452Y2V3; -.
DR EnsemblPlants; AET1Gv20266300.17; AET1Gv20266300.17; AET1Gv20266300.
DR Gramene; AET1Gv20266300.17; AET1Gv20266300.17; AET1Gv20266300.
DR Proteomes; UP000015105; Chromosome 1D.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0009536; C:plastid; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-EC.
DR GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR Gene3D; 1.10.132.30; -; 1.
DR Gene3D; 2.40.40.20; -; 1.
DR Gene3D; 6.20.50.80; -; 1.
DR Gene3D; 3.30.1490.180; RNA polymerase ii; 1.
DR Gene3D; 1.10.274.100; RNA polymerase Rpb1, domain 3; 1.
DR InterPro; IPR045867; DNA-dir_RpoC_beta_prime.
DR InterPro; IPR000722; RNA_pol_asu.
DR InterPro; IPR006592; RNA_pol_N.
DR InterPro; IPR007066; RNA_pol_Rpb1_3.
DR InterPro; IPR042102; RNA_pol_Rpb1_3_sf.
DR InterPro; IPR007083; RNA_pol_Rpb1_4.
DR InterPro; IPR038120; Rpb1_funnel_sf.
DR PANTHER; PTHR19376; DNA-DIRECTED RNA POLYMERASE; 1.
DR PANTHER; PTHR19376:SF36; DNA-DIRECTED RNA POLYMERASE IV SUBUNIT 1; 1.
DR Pfam; PF00623; RNA_pol_Rpb1_2; 1.
DR Pfam; PF04983; RNA_pol_Rpb1_3; 1.
DR Pfam; PF05000; RNA_pol_Rpb1_4; 1.
DR SMART; SM00663; RPOLA_N; 1.
DR SUPFAM; SSF64484; beta and beta-prime subunits of DNA dependent RNA-polymerase; 1.
PE 4: Predicted;
KW DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW Plastid {ECO:0000256|ARBA:ARBA00022640};
KW Reference proteome {ECO:0000313|Proteomes:UP000015105};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transferase {ECO:0000256|ARBA:ARBA00022679};
KW Zinc {ECO:0000256|ARBA:ARBA00022833}.
FT DOMAIN 69..359
FT /note="RNA polymerase N-terminal"
FT /evidence="ECO:0000259|SMART:SM00663"
SQ SEQUENCE 986 AA; 109914 MW; F02B0EADD47A6D17 CRC64;
MDKISLTAEV ADRVTDSAEV LPLDYWDFVP HHHPPQSNMT KILLSPYQVS HILEQLDPKL
FSRFASRPEL IFLSCLPVTP NFHRVAELPY GFSDGPRLAY DDLTKAYKRT VDVGRKLDDL
RQHPQFSVLA SSLVTSRVVE CLKLSKLHSK KTDKESSTDT HGMKWLKDAI LSKRSDNAFR
GTMVGDPKIR LHEIGIPVDL ASNLVVSEHV NSYNFDNINL KCNCYLLANE KLVIKRSGKT
IIVRKPNQLV IGDTVHRLLQ DGDLILINRP PSIHQHSLIG LSAKLLPVQS VLSINPLCCA
PLAGDFDGDC LHGYVPQSIQ SRVELGELVS LSHQLLNAQD GRSLVSLTHD SLAAAYLLTS
SEVLLKKTEV QQFQMLLCHP LSPTPGPAIM KSIHSHGPLW TGKQLFSMLL PSDMSFSIEP
KVHIVDGEVL ACPSESFWLQ NSISGLFSVM FKQYGDKALE LLSSAQDVLC EFLTMRGLSV
SLSDIYLFPD HDSRRKLADG VNLALDDAEE AFRIKQILLS PDSIPILKCY DDCADLSQSY
EQSNFIQSNL PIIKSSIMAF KSVFSDLQKM VQQHTAKNNS MMMMTNAGSK GSMLKFVQQT
ACVGLQLPAS RFPFRIPSEL SCASWNRHKS EGTGECLGGQ NLYAVIRNSF AGGLNPLECL
LHSISGRANF FSENADVPGT LTRKLMYHLR DLYVAYDGTV RSSYGQQIMQ FTYDTAEDMC
SDRNVEGELG APVGSWAACS ISEAAYGALD HPVNSLEESP LMNLQDVLKC QKGGTSMDHV
GLLFLSKNLK KYRYGLEYAS LEVKDHLEPV NFSDLVDTVM ILYGGCGIES TKGSPWITHF
HLSQEMMTKK RLGLTLVVEE LTEQYNAKRD KLNFPKVYIS KGKCSADHEC GNRQTCCITV
VTQDDSNSMS QLDTIKKRVI PNLLALLVKG FLEFKKVEIQ CQEDSELVVK VVMSEEHCKS
VKFWATLQKS CIAIMELIDW ERSRPG
//