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Database: UniProt
Entry: A0A452Y2V3_AEGTS
LinkDB: A0A452Y2V3_AEGTS
Original site: A0A452Y2V3_AEGTS 
ID   A0A452Y2V3_AEGTS        Unreviewed;       986 AA.
AC   A0A452Y2V3;
DT   08-MAY-2019, integrated into UniProtKB/TrEMBL.
DT   08-MAY-2019, sequence version 1.
DT   24-JAN-2024, entry version 24.
DE   RecName: Full=DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00012418};
DE            EC=2.7.7.6 {ECO:0000256|ARBA:ARBA00012418};
OS   Aegilops tauschii subsp. strangulata (Goatgrass).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Pooideae; Triticodae; Triticeae; Triticinae; Aegilops.
OX   NCBI_TaxID=200361 {ECO:0000313|EnsemblPlants:AET1Gv20266300.17, ECO:0000313|Proteomes:UP000015105};
RN   [1] {ECO:0000313|Proteomes:UP000015105}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. AL8/78 {ECO:0000313|Proteomes:UP000015105};
RX   PubMed=25035499; DOI=10.1126/science.1250092;
RG   International Wheat Genome Sequencing Consortium,;
RA   Marcussen T., Sandve S.R., Heier L., Spannagl M., Pfeifer M.,
RA   Jakobsen K.S., Wulff B.B., Steuernagel B., Mayer K.F., Olsen O.A.;
RT   "Ancient hybridizations among the ancestral genomes of bread wheat.";
RL   Science 345:1250092-1250092(2014).
RN   [2] {ECO:0000313|Proteomes:UP000015105}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. AL8/78 {ECO:0000313|Proteomes:UP000015105};
RX   PubMed=29158546; DOI=10.1038/s41477-017-0067-8;
RA   Zhao G., Zou C., Li K., Wang K., Li T., Gao L., Zhang X., Wang H., Yang Z.,
RA   Liu X., Jiang W., Mao L., Kong X., Jiao Y., Jia J.;
RT   "The Aegilops tauschii genome reveals multiple impacts of transposons.";
RL   Nat. Plants 3:946-955(2017).
RN   [3] {ECO:0000313|EnsemblPlants:AET1Gv20266300.17}
RP   IDENTIFICATION.
RG   EnsemblPlants;
RL   Submitted (MAR-2019) to UniProtKB.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC         RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:14527, Rhea:RHEA-
CC         COMP:17342, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:140395;
CC         EC=2.7.7.6; Evidence={ECO:0000256|ARBA:ARBA00024550};
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DR   AlphaFoldDB; A0A452Y2V3; -.
DR   EnsemblPlants; AET1Gv20266300.17; AET1Gv20266300.17; AET1Gv20266300.
DR   Gramene; AET1Gv20266300.17; AET1Gv20266300.17; AET1Gv20266300.
DR   Proteomes; UP000015105; Chromosome 1D.
DR   GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR   GO; GO:0009536; C:plastid; IEA:UniProtKB-KW.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-EC.
DR   GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR   Gene3D; 1.10.132.30; -; 1.
DR   Gene3D; 2.40.40.20; -; 1.
DR   Gene3D; 6.20.50.80; -; 1.
DR   Gene3D; 3.30.1490.180; RNA polymerase ii; 1.
DR   Gene3D; 1.10.274.100; RNA polymerase Rpb1, domain 3; 1.
DR   InterPro; IPR045867; DNA-dir_RpoC_beta_prime.
DR   InterPro; IPR000722; RNA_pol_asu.
DR   InterPro; IPR006592; RNA_pol_N.
DR   InterPro; IPR007066; RNA_pol_Rpb1_3.
DR   InterPro; IPR042102; RNA_pol_Rpb1_3_sf.
DR   InterPro; IPR007083; RNA_pol_Rpb1_4.
DR   InterPro; IPR038120; Rpb1_funnel_sf.
DR   PANTHER; PTHR19376; DNA-DIRECTED RNA POLYMERASE; 1.
DR   PANTHER; PTHR19376:SF36; DNA-DIRECTED RNA POLYMERASE IV SUBUNIT 1; 1.
DR   Pfam; PF00623; RNA_pol_Rpb1_2; 1.
DR   Pfam; PF04983; RNA_pol_Rpb1_3; 1.
DR   Pfam; PF05000; RNA_pol_Rpb1_4; 1.
DR   SMART; SM00663; RPOLA_N; 1.
DR   SUPFAM; SSF64484; beta and beta-prime subunits of DNA dependent RNA-polymerase; 1.
PE   4: Predicted;
KW   DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478};
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW   Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW   Plastid {ECO:0000256|ARBA:ARBA00022640};
KW   Reference proteome {ECO:0000313|Proteomes:UP000015105};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transferase {ECO:0000256|ARBA:ARBA00022679};
KW   Zinc {ECO:0000256|ARBA:ARBA00022833}.
FT   DOMAIN          69..359
FT                   /note="RNA polymerase N-terminal"
FT                   /evidence="ECO:0000259|SMART:SM00663"
SQ   SEQUENCE   986 AA;  109914 MW;  F02B0EADD47A6D17 CRC64;
     MDKISLTAEV ADRVTDSAEV LPLDYWDFVP HHHPPQSNMT KILLSPYQVS HILEQLDPKL
     FSRFASRPEL IFLSCLPVTP NFHRVAELPY GFSDGPRLAY DDLTKAYKRT VDVGRKLDDL
     RQHPQFSVLA SSLVTSRVVE CLKLSKLHSK KTDKESSTDT HGMKWLKDAI LSKRSDNAFR
     GTMVGDPKIR LHEIGIPVDL ASNLVVSEHV NSYNFDNINL KCNCYLLANE KLVIKRSGKT
     IIVRKPNQLV IGDTVHRLLQ DGDLILINRP PSIHQHSLIG LSAKLLPVQS VLSINPLCCA
     PLAGDFDGDC LHGYVPQSIQ SRVELGELVS LSHQLLNAQD GRSLVSLTHD SLAAAYLLTS
     SEVLLKKTEV QQFQMLLCHP LSPTPGPAIM KSIHSHGPLW TGKQLFSMLL PSDMSFSIEP
     KVHIVDGEVL ACPSESFWLQ NSISGLFSVM FKQYGDKALE LLSSAQDVLC EFLTMRGLSV
     SLSDIYLFPD HDSRRKLADG VNLALDDAEE AFRIKQILLS PDSIPILKCY DDCADLSQSY
     EQSNFIQSNL PIIKSSIMAF KSVFSDLQKM VQQHTAKNNS MMMMTNAGSK GSMLKFVQQT
     ACVGLQLPAS RFPFRIPSEL SCASWNRHKS EGTGECLGGQ NLYAVIRNSF AGGLNPLECL
     LHSISGRANF FSENADVPGT LTRKLMYHLR DLYVAYDGTV RSSYGQQIMQ FTYDTAEDMC
     SDRNVEGELG APVGSWAACS ISEAAYGALD HPVNSLEESP LMNLQDVLKC QKGGTSMDHV
     GLLFLSKNLK KYRYGLEYAS LEVKDHLEPV NFSDLVDTVM ILYGGCGIES TKGSPWITHF
     HLSQEMMTKK RLGLTLVVEE LTEQYNAKRD KLNFPKVYIS KGKCSADHEC GNRQTCCITV
     VTQDDSNSMS QLDTIKKRVI PNLLALLVKG FLEFKKVEIQ CQEDSELVVK VVMSEEHCKS
     VKFWATLQKS CIAIMELIDW ERSRPG
//
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