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Database: UniProt
Entry: A0A482MN52_9CAUD
LinkDB: A0A482MN52_9CAUD
Original site: A0A482MN52_9CAUD 
ID   A0A482MN52_9CAUD        Unreviewed;       359 AA.
AC   A0A482MN52;
DT   05-JUN-2019, integrated into UniProtKB/TrEMBL.
DT   05-JUN-2019, sequence version 1.
DT   13-SEP-2023, entry version 14.
DE   SubName: Full=Photosystem II protein D1 {ECO:0000313|EMBL:QBQ75098.1};
GN   ORFNames=RW110999_222 {ECO:0000313|EMBL:QBQ75098.1};
OS   Cyanophage S-RIM4.
OC   Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes;
OC   Kyanoviridae; Shandvirus.
OX   NCBI_TaxID=2530169 {ECO:0000313|EMBL:QBQ75098.1, ECO:0000313|Proteomes:UP000299828};
RN   [1] {ECO:0000313|EMBL:QBQ75098.1, ECO:0000313|Proteomes:UP000299828}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=RW_11_0999 {ECO:0000313|EMBL:QBQ75098.1};
RA   Marston M.F.;
RT   "Diversity in Cyanophage Genomes from Southern New England Coastal
RT   Waters.";
RL   Submitted (FEB-2019) to the EMBL/GenBank/DDBJ databases.
CC   -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC       pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
CC   -!- SIMILARITY: Belongs to the reaction center PufL/M/PsbA/D family.
CC       {ECO:0000256|ARBA:ARBA00008204}.
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DR   EMBL; MK493321; QBQ75098.1; -; Genomic_DNA.
DR   Proteomes; UP000299828; Genome.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0016168; F:chlorophyll binding; IEA:UniProtKB-KW.
DR   GO; GO:0045156; F:electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity; IEA:InterPro.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0009772; P:photosynthetic electron transport in photosystem II; IEA:InterPro.
DR   GO; GO:0009635; P:response to herbicide; IEA:UniProtKB-KW.
DR   Gene3D; 1.20.85.10; Photosystem II protein D1-like; 1.
DR   HAMAP; MF_01379; PSII_PsbA_D1; 1.
DR   InterPro; IPR036854; Photo_II_D1/D2_sf.
DR   InterPro; IPR000484; Photo_RC_L/M.
DR   InterPro; IPR005867; PSII_D1.
DR   NCBIfam; TIGR01151; psbA; 1.
DR   PANTHER; PTHR33149:SF12; PHOTOSYSTEM II D2 PROTEIN; 1.
DR   PANTHER; PTHR33149; PHOTOSYSTEM II PROTEIN D1; 1.
DR   Pfam; PF00124; Photo_RC; 1.
DR   PRINTS; PR00256; REACTNCENTRE.
DR   SUPFAM; SSF81483; Bacterial photosystem II reaction centre, L and M subunits; 1.
DR   PROSITE; PS00244; REACTION_CENTER; 1.
PE   3: Inferred from homology;
KW   Calcium {ECO:0000256|ARBA:ARBA00022837};
KW   Chlorophyll {ECO:0000256|ARBA:ARBA00022494};
KW   Chromophore {ECO:0000256|ARBA:ARBA00022991};
KW   Herbicide resistance {ECO:0000256|ARBA:ARBA00022646};
KW   Magnesium {ECO:0000256|ARBA:ARBA00022842};
KW   Manganese {ECO:0000256|ARBA:ARBA00023211};
KW   Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW   Photosynthesis {ECO:0000256|ARBA:ARBA00022531};
KW   Reference proteome {ECO:0000313|Proteomes:UP000299828};
KW   Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW   ECO:0000256|SAM:Phobius}.
FT   TRANSMEM        29..55
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        109..127
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        139..161
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        197..218
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        273..295
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
SQ   SEQUENCE   359 AA;  39538 MW;  076F28A5E3803AA2 CRC64;
     MTATLSQQRS TSQWEQFCNW VTSTDNRLYV GWFGVLMIPC LLAATICFII AFVGAPPVDI
     DGIREPVAGS LMYGNNIISG AVIPSSNAIG LHFYPIWEAA SLDEWLYNGG PFQLVIFHFL
     IGIYAYMGRE WELSYRLGMR PWICVAYSAP VAAASAVFLV YPFGQGSFSD AMPLGISGTF
     NYMLVFQAEH NILMHPFHML GVAGVFGGSL FSAMHGSLVT SSLVRETTEN ESQNYGYKFG
     QEEETYNIVA AHGYFGRLIF QYASFNNSRS LHFFLAAWPV VGIWFTALGV STMAFNLNGF
     NFNQSIIDSQ GRVLNTWADV LNRAGLGMEV MHERNAHNFP LDLAAAESTP VALTAPAIG
//
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