GenomeNet

Database: UniProt
Entry: A0A484CZ54_PERFV
LinkDB: A0A484CZ54_PERFV
Original site: A0A484CZ54_PERFV 
ID   A0A484CZ54_PERFV        Unreviewed;       233 AA.
AC   A0A484CZ54;
DT   05-JUN-2019, integrated into UniProtKB/TrEMBL.
DT   05-JUN-2019, sequence version 1.
DT   22-FEB-2023, entry version 13.
DE   RecName: Full=Claudin {ECO:0000256|RuleBase:RU060637};
GN   ORFNames=EPR50_G00096340 {ECO:0000313|EMBL:TDH08306.1};
OS   Perca flavescens (American yellow perch) (Morone flavescens).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC   Eupercaria; Perciformes; Percoidei; Percidae; Percinae; Perca.
OX   NCBI_TaxID=8167 {ECO:0000313|EMBL:TDH08306.1, ECO:0000313|Proteomes:UP000295070};
RN   [1] {ECO:0000313|EMBL:TDH08306.1, ECO:0000313|Proteomes:UP000295070}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=YP-PL-M2 {ECO:0000313|EMBL:TDH08306.1};
RC   TISSUE=Blood {ECO:0000313|EMBL:TDH08306.1};
RA   Feron R., Morvezen R., Bestin A., Haffray P., Klopp C., Zahm M., Cabau C.,
RA   Roques C., Donnadieu C., Bouchez O., Christie M., Larson W., Guiguen Y.;
RT   "A chromosome-scale genome assembly of the yellow perch, Perca
RT   flavescens.";
RL   Submitted (JAN-2019) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Plays a major role in tight junction-specific obliteration of
CC       the intercellular space, through calcium-independent cell-adhesion
CC       activity. {ECO:0000256|RuleBase:RU060637}.
CC   -!- SUBCELLULAR LOCATION: Cell junction, tight junction
CC       {ECO:0000256|RuleBase:RU060637}. Cell membrane
CC       {ECO:0000256|RuleBase:RU060637}; Multi-pass membrane protein
CC       {ECO:0000256|RuleBase:RU060637}. Membrane
CC       {ECO:0000256|ARBA:ARBA00004141}; Multi-pass membrane protein
CC       {ECO:0000256|ARBA:ARBA00004141}.
CC   -!- SIMILARITY: Belongs to the claudin family.
CC       {ECO:0000256|ARBA:ARBA00008295, ECO:0000256|RuleBase:RU060637}.
CC   -!- CAUTION: Lacks conserved residue(s) required for the propagation of
CC       feature annotation. {ECO:0000256|RuleBase:RU060637}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:TDH08306.1}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; SCKG01000009; TDH08306.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A484CZ54; -.
DR   STRING; 8167.A0A484CZ54; -.
DR   Proteomes; UP000295070; Chromosome 9.
DR   GO; GO:0005923; C:bicellular tight junction; IEA:UniProtKB-SubCell.
DR   GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR   Gene3D; 1.20.140.150; -; 1.
DR   InterPro; IPR006187; Claudin.
DR   InterPro; IPR003928; Claudin18.
DR   InterPro; IPR017974; Claudin_CS.
DR   InterPro; IPR004031; PMP22/EMP/MP20/Claudin.
DR   PANTHER; PTHR12002; CLAUDIN; 1.
DR   PANTHER; PTHR12002:SF9; CLAUDIN-18; 1.
DR   Pfam; PF00822; PMP22_Claudin; 1.
DR   PRINTS; PR01077; CLAUDIN.
DR   PRINTS; PR01448; CLAUDIN18.
DR   PROSITE; PS01346; CLAUDIN; 1.
PE   3: Inferred from homology;
KW   Cell junction {ECO:0000256|ARBA:ARBA00022949,
KW   ECO:0000256|RuleBase:RU060637};
KW   Cell membrane {ECO:0000256|RuleBase:RU060637};
KW   Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|RuleBase:RU060637};
KW   Reference proteome {ECO:0000313|Proteomes:UP000295070};
KW   Tight junction {ECO:0000256|ARBA:ARBA00022427,
KW   ECO:0000256|RuleBase:RU060637};
KW   Transmembrane {ECO:0000256|ARBA:ARBA00022692,
KW   ECO:0000256|RuleBase:RU060637};
KW   Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW   ECO:0000256|RuleBase:RU060637}.
FT   TRANSMEM        55..75
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|RuleBase:RU060637"
FT   TRANSMEM        96..118
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|RuleBase:RU060637"
FT   TRANSMEM        155..177
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|RuleBase:RU060637"
FT   REGION          205..233
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        218..233
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   233 AA;  25075 MW;  7DE488F850BC9D26 CRC64;
     MDQWATEDLF DNPVTAIFSY SGLWNSCVRQ SSGFTECRPY FTILGLPALL QAVRALMIVG
     IVLGAIGCLI AIFSMKCLKM GNMEDNIKAT MTLTSGIMFL LAGVCGIAGV SAFANLIVQS
     FRFTTFADGG FSSFGGAGIG GLSGNLTPRY TFGPALFVGW IGGAILVVGG VMMCLACRGM
     TPDRNRPYDG MAYKAASHHT IYKSDTRPRP AINDSYKAQS MEGRQSNQRF DYV
//
DBGET integrated database retrieval system