ID A0A484FF23_COLOR Unreviewed; 653 AA.
AC A0A484FF23;
DT 05-JUN-2019, integrated into UniProtKB/TrEMBL.
DT 05-JUN-2019, sequence version 1.
DT 27-MAR-2024, entry version 21.
DE RecName: Full=histone deacetylase {ECO:0000256|ARBA:ARBA00012111};
DE EC=3.5.1.98 {ECO:0000256|ARBA:ARBA00012111};
GN Name=RPD3 {ECO:0000313|EMBL:TDZ16221.1};
GN ORFNames=Cob_v010916 {ECO:0000313|EMBL:TDZ16221.1};
OS Colletotrichum orbiculare (strain 104-T / ATCC 96160 / CBS 514.97 / LARS
OS 414 / MAFF 240422) (Cucumber anthracnose fungus) (Colletotrichum
OS lagenarium).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes;
OC Hypocreomycetidae; Glomerellales; Glomerellaceae; Colletotrichum;
OC Colletotrichum orbiculare species complex.
OX NCBI_TaxID=1213857 {ECO:0000313|EMBL:TDZ16221.1, ECO:0000313|Proteomes:UP000014480};
RN [1] {ECO:0000313|Proteomes:UP000014480}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=104-T / ATCC 96160 / CBS 514.97 / LARS 414 / MAFF 240422
RC {ECO:0000313|Proteomes:UP000014480};
RX PubMed=23252678; DOI=10.1111/nph.12085;
RA Gan P., Ikeda K., Irieda H., Narusaka M., O'Connell R.J., Narusaka Y.,
RA Takano Y., Kubo Y., Shirasu K.;
RT "Comparative genomic and transcriptomic analyses reveal the hemibiotrophic
RT stage shift of Colletotrichum fungi.";
RL New Phytol. 197:1236-1249(2013).
RN [2] {ECO:0000313|Proteomes:UP000014480}
RP GENOME REANNOTATION.
RC STRAIN=104-T / ATCC 96160 / CBS 514.97 / LARS 414 / MAFF 240422
RC {ECO:0000313|Proteomes:UP000014480};
RX PubMed=30893003; DOI=10.1094/MPMI-12-18-0352-A;
RA Gan P., Tsushima A., Narusaka M., Narusaka Y., Takano Y., Kubo Y.,
RA Shirasu K.;
RT "Genome sequence resources for four phytopathogenic fungi from the
RT Colletotrichum orbiculare species complex.";
RL Mol. Plant Microbe Interact. 32:1088-1090(2019).
CC -!- SIMILARITY: Belongs to the histone deacetylase family. HD type 1
CC subfamily. {ECO:0000256|ARBA:ARBA00006457}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:TDZ16221.1}.
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DR EMBL; AMCV02000036; TDZ16221.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A484FF23; -.
DR STRING; 1213857.A0A484FF23; -.
DR Proteomes; UP000014480; Unassembled WGS sequence.
DR GO; GO:1902494; C:catalytic complex; IEA:UniProt.
DR GO; GO:0043231; C:intracellular membrane-bounded organelle; IEA:UniProt.
DR GO; GO:0004407; F:histone deacetylase activity; IEA:UniProtKB-EC.
DR GO; GO:0010468; P:regulation of gene expression; IEA:UniProt.
DR CDD; cd10004; RPD3-like; 1.
DR Gene3D; 3.40.800.20; Histone deacetylase domain; 1.
DR InterPro; IPR000286; His_deacetylse.
DR InterPro; IPR003084; His_deacetylse_1.
DR InterPro; IPR023801; His_deacetylse_dom.
DR InterPro; IPR037138; His_deacetylse_dom_sf.
DR InterPro; IPR023696; Ureohydrolase_dom_sf.
DR PANTHER; PTHR10625:SF13; HISTONE DEACETYLASE HDAC1; 1.
DR PANTHER; PTHR10625; HISTONE DEACETYLASE HDAC1-RELATED; 1.
DR Pfam; PF00850; Hist_deacetyl; 1.
DR PRINTS; PR01270; HDASUPER.
DR PRINTS; PR01271; HISDACETLASE.
DR SUPFAM; SSF52768; Arginase/deacetylase; 1.
PE 3: Inferred from homology;
KW Chromatin regulator {ECO:0000256|ARBA:ARBA00022853};
KW Reference proteome {ECO:0000313|Proteomes:UP000014480}.
FT DOMAIN 36..325
FT /note="Histone deacetylase"
FT /evidence="ECO:0000259|Pfam:PF00850"
FT REGION 381..653
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 416..434
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 457..471
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 552..608
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 619..653
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 653 AA; 72466 MW; ED3322AACAA84519 CRC64;
MSPLGSVALA NGSSSPKKVA YFYDSDIGNY AYVTGHPMKP HRIRLAHSLI MHYELFKNME
IYRAKPATKG EMTQFHTDEY IDFLQKVTPD NMDAYQKEQG KYNVGDDCPV FDGLFEFCGI
SAGGSMEGAA RLNREKCDIA VNWAGGLHHA KKSEASGFCY VNDIVLGIIE LLRFKKRVLY
IDIDVHHGDG VEEAFYTTDR VMTVSFHKYG EYFPGTGELR DIGIGAGKHY AVNFPLRDGI
DDDSYKSIFE PVIEHVMKFY QPEAVVLQCG GDSLSGDRLG CFNLSMEGHA NCVGYVKSFG
LPTLVLGGGG YTMRNVARTW AYETGVLVGK HLPRTLPYNE YYEYYAPDFE LNVRPSNMEN
SNSFEYLEKI KTAVIENLRH TQPAPSVQMQ DVPRQPLPGG MTDEEEAELN DLDEDEHPDE
RMTQRRWEQR TNNEADFEDS DDEDMEQANG ITRPRNAKKR TFNDFRQPEA EVEAESGAPS
PVNGTSADDA PNAEPIVDAD ITLENPADAD ESSDKAASEE SVVVAKDPVE QPTEAVVDED
GDVGMGDGGE AEEPAKAIKT EEVEAEPAQV AEKEDKEKQP LSRKPSAEPT TETCERDVAE
KVPEVPKEPA VVVKDTVAGA EEALDKPEEK AVEPSEDKMD VDEKPEAESR SKE
//
