ID A0A494YSP6_9BACI Unreviewed; 291 AA.
AC A0A494YSP6;
DT 05-JUN-2019, integrated into UniProtKB/TrEMBL.
DT 05-JUN-2019, sequence version 1.
DT 03-MAY-2023, entry version 10.
DE SubName: Full=5'-3' exonuclease {ECO:0000313|EMBL:RKQ13144.1};
GN ORFNames=D8M05_17185 {ECO:0000313|EMBL:RKQ13144.1};
OS Oceanobacillus bengalensis.
OC Bacteria; Bacillota; Bacilli; Bacillales; Bacillaceae; Oceanobacillus.
OX NCBI_TaxID=1435466 {ECO:0000313|EMBL:RKQ13144.1, ECO:0000313|Proteomes:UP000281813};
RN [1] {ECO:0000313|EMBL:RKQ13144.1, ECO:0000313|Proteomes:UP000281813}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MCCC 1K00260 {ECO:0000313|EMBL:RKQ13144.1,
RC ECO:0000313|Proteomes:UP000281813};
RX PubMed=26303283; DOI=10.1007/s10482-015-0573-5;
RA Yongchang O., Xiang W., Wang G.;
RT "Oceanobacillus bengalensis sp. nov., a bacterium isolated from seawater of
RT the Bay of Bengal.";
RL Antonie Van Leeuwenhoek 108:1189-1196(2015).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RKQ13144.1}.
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DR EMBL; RBZO01000036; RKQ13144.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A494YSP6; -.
DR OrthoDB; 9806424at2; -.
DR Proteomes; UP000281813; Unassembled WGS sequence.
DR GO; GO:0017108; F:5'-flap endonuclease activity; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.
DR GO; GO:0033567; P:DNA replication, Okazaki fragment processing; IEA:InterPro.
DR CDD; cd09898; H3TH_53EXO; 1.
DR CDD; cd09859; PIN_53EXO; 1.
DR Gene3D; 1.10.150.20; 5' to 3' exonuclease, C-terminal subdomain; 1.
DR Gene3D; 3.40.50.1010; 5'-nuclease; 1.
DR InterPro; IPR020046; 5-3_exonucl_a-hlix_arch_N.
DR InterPro; IPR002421; 5-3_exonuclease.
DR InterPro; IPR036279; 5-3_exonuclease_C_sf.
DR InterPro; IPR020045; DNA_polI_H3TH.
DR InterPro; IPR038969; FEN.
DR InterPro; IPR008918; HhH2.
DR InterPro; IPR029060; PIN-like_dom_sf.
DR PANTHER; PTHR42646:SF2; DNA-DIRECTED DNA POLYMERASE; 1.
DR PANTHER; PTHR42646; FLAP ENDONUCLEASE XNI; 1.
DR Pfam; PF01367; 5_3_exonuc; 1.
DR Pfam; PF02739; 5_3_exonuc_N; 1.
DR SMART; SM00475; 53EXOc; 1.
DR SMART; SM00279; HhH2; 1.
DR SUPFAM; SSF47807; 5' to 3' exonuclease, C-terminal subdomain; 1.
DR SUPFAM; SSF88723; PIN domain-like; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Exonuclease {ECO:0000313|EMBL:RKQ13144.1};
KW Hydrolase {ECO:0000313|EMBL:RKQ13144.1};
KW Nuclease {ECO:0000313|EMBL:RKQ13144.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000281813}.
FT DOMAIN 4..265
FT /note="5'-3' exonuclease"
FT /evidence="ECO:0000259|SMART:SM00475"
SQ SEQUENCE 291 AA; 33116 MW; D8F3FE0D40BF15C7 CRC64;
MEKNKILLVD GMALLFRGFF ATSFRGNFML TKSGVPTNGI YQFMRYFLDA VDHFEPTHVI
CCWDMGSKTF RSDLYEGYKA NRGEPPVELV PQFDLVKEVV QAFDMPNIGL KNYEADDCIG
TLAKVYSMDH EVIILTGDQD ILQLVDDGIH VAIMRKGLGN YEVFTQENFY EKKGIHPKQV
IDVKGLMGDT ADNYPGVKGI GEKTAVKLLQ EYETIDGLLE NMDKLPKGVQ TKINNNLDML
HLSRTLAEIK CDVPVECSLE DALWDYKEEK ILNKFDELEF THFTKLIKTS V
//