ID A0A495J6G6_9SPHI Unreviewed; 682 AA.
AC A0A495J6G6;
DT 05-JUN-2019, integrated into UniProtKB/TrEMBL.
DT 05-JUN-2019, sequence version 1.
DT 13-SEP-2023, entry version 14.
DE SubName: Full=Type IV secretory system conjugative DNA transfer VirD4/TraG family protein {ECO:0000313|EMBL:RKR84301.1};
GN ORFNames=BDD43_4533 {ECO:0000313|EMBL:RKR84301.1};
OS Mucilaginibacter gracilis.
OC Bacteria; Bacteroidota; Sphingobacteriia; Sphingobacteriales;
OC Sphingobacteriaceae; Mucilaginibacter.
OX NCBI_TaxID=423350 {ECO:0000313|EMBL:RKR84301.1, ECO:0000313|Proteomes:UP000268007};
RN [1] {ECO:0000313|EMBL:RKR84301.1, ECO:0000313|Proteomes:UP000268007}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 18602 {ECO:0000313|EMBL:RKR84301.1,
RC ECO:0000313|Proteomes:UP000268007};
RA Goeker M.;
RT "Genomic Encyclopedia of Archaeal and Bacterial Type Strains, Phase II
RT (KMG-II): from individual species to whole genera.";
RL Submitted (OCT-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
CC -!- SIMILARITY: Belongs to the VirD4/TraG family.
CC {ECO:0000256|ARBA:ARBA00008806}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RKR84301.1}.
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DR EMBL; RBKU01000001; RKR84301.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A495J6G6; -.
DR OrthoDB; 102453at2; -.
DR Proteomes; UP000268007; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR CDD; cd01127; TrwB_TraG_TraD_VirD4; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR003688; TraG/VirD4.
DR InterPro; IPR025988; YWFCY_dom.
DR NCBIfam; NF041326; Bacteroid_MobC; 1.
DR PANTHER; PTHR37937; CONJUGATIVE TRANSFER: DNA TRANSPORT; 1.
DR PANTHER; PTHR37937:SF1; CONJUGATIVE TRANSFER: DNA TRANSPORT; 1.
DR Pfam; PF02534; T4SS-DNA_transf; 1.
DR Pfam; PF14293; YWFCY; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000268007};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 19..40
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 60..81
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 93..114
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 120..143
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 5..148
FT /note="YWFCY"
FT /evidence="ECO:0000259|Pfam:PF14293"
FT REGION 648..682
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 648..671
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 682 AA; 76957 MW; 99564F2913978448 CRC64;
MQTGEDIQGL RKIIDFTRLI SLTILCIHFY ISCFAAFKYW HWTAEITNRL VMNIGKTGLF
TGMLKPKLAA LLLLVVSLIG AKGKKDETIR KDTIAIYIGA GLLLYFISVL FFYLNATATI
IAVSYIGITG LGYLLVLTGG GRLSRLLKLN LQKDIFNSEN ETFPQDEQLR VNEYSVNLPA
QYNLKGKVRN SWINFINPFR GLLVVGTPGA GKSYFVIRHV IDQHLKKGFS MFIYDFKFDD
LTKIAYNKLK KYQKNYKVKP KFYLINFDDL SRTHRCNPLD PQSMDDITDA TEASRTILLG
LNREWIKKQG DFFVESPINF LTAIIWYLRK YENGRYCTLP HVIELMQADY EELFPILKEQ
EEIKVLINPF ISAFQNKAKE QLEGQVASAK ISLARLSSPQ LYYVLSGNDF TLDINNPAAP
KIVCMGNNPQ KLQTYGAVLS LYISRVIKLA NRKNQLKSSL IFDEFPTIYF NNIDSLIATA
RSNKVATTLG IQDYSQLKKD YGREQAEVIM NIVGNIISGQ VTGDTAKQLS ERIGKIMQER
NSVSINNNDT SVSKSTQLDF AVPASKISAL SSGTFVGMVA DNPDEKIALK VFHSEIQNDH
AGIKAEEDRY QPVPVINRVT AVDIQENYLM IKADVQSLID TEIGILKERK AAETPLEPQK
EADKPENKDN NDEGPQGQVI SM
//
