ID A0A495RIY7_9GAMM Unreviewed; 726 AA.
AC A0A495RIY7;
DT 05-JUN-2019, integrated into UniProtKB/TrEMBL.
DT 05-JUN-2019, sequence version 1.
DT 27-MAR-2024, entry version 13.
DE SubName: Full=DNA-binding LacI/PurR family transcriptional regulator {ECO:0000313|EMBL:RKS87126.1};
GN ORFNames=DES39_0340 {ECO:0000313|EMBL:RKS87126.1};
OS Orbus hercynius.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Orbales; Orbaceae; Orbus.
OX NCBI_TaxID=593135 {ECO:0000313|EMBL:RKS87126.1, ECO:0000313|Proteomes:UP000278542};
RN [1] {ECO:0000313|EMBL:RKS87126.1, ECO:0000313|Proteomes:UP000278542}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 22228 {ECO:0000313|EMBL:RKS87126.1,
RC ECO:0000313|Proteomes:UP000278542};
RA Goeker M.;
RT "Genomic Encyclopedia of Type Strains, Phase IV (KMG-IV): sequencing the
RT most valuable type-strain genomes for metagenomic binning, comparative
RT biology and taxonomic classification.";
RL Submitted (OCT-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RKS87126.1}.
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DR EMBL; RBWY01000001; RKS87126.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A495RIY7; -.
DR OrthoDB; 9808332at2; -.
DR Proteomes; UP000278542; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd01392; HTH_LacI; 1.
DR Gene3D; 3.40.50.2300; -; 2.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR Gene3D; 3.40.190.10; Periplasmic binding protein-like II; 2.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR000843; HTH_LacI.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR028082; Peripla_BP_I.
DR InterPro; IPR006059; SBP.
DR PANTHER; PTHR30146:SF152; HTH-TYPE TRANSCRIPTIONAL REGULATOR EBGR-RELATED; 1.
DR PANTHER; PTHR30146; LACI-RELATED TRANSCRIPTIONAL REPRESSOR; 1.
DR Pfam; PF00356; LacI; 1.
DR Pfam; PF01547; SBP_bac_1; 1.
DR PRINTS; PR00036; HTHLACI.
DR SMART; SM00354; HTH_LACI; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR SUPFAM; SSF53822; Periplasmic binding protein-like I; 1.
DR SUPFAM; SSF53850; Periplasmic binding protein-like II; 1.
DR PROSITE; PS50943; HTH_CROC1; 1.
DR PROSITE; PS00356; HTH_LACI_1; 1.
DR PROSITE; PS50932; HTH_LACI_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000313|EMBL:RKS87126.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000278542};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 2..56
FT /note="HTH lacI-type"
FT /evidence="ECO:0000259|PROSITE:PS50932"
FT DOMAIN 3..39
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000259|PROSITE:PS50943"
SQ SEQUENCE 726 AA; 83347 MW; 9DD6D54142F9AA86 CRC64;
MSTIKDIAKM AGVSHGTVSN VLNGRGNVSV KKIKLVEDAA QKLGYRLNAQ AKILKEGFAK
TISIVLPNIT SEQYHCLYER LFSDLVAQGY ELTLYITRDA KERELQFIQK IATKRDSAVI
VVSCLDSAES YYQMLQTPKN KIIFVYRKPA CAEQFISLDF EQAGRDIADA VMTKQYHRIG
LFSNSIKNAH SYALKQGLLN RFDELKYAVQ LYHAESVPSD GTYNLAFSFF NQPNEPFEVI
ITSDIERAHY VRSANYFGHQ AKCPPIYTLS NEGFRYDDNF YQYHMNYGLL SQNIVNLVEG
DELIAVKNKG YFFFADNFDH QPITTPCKTL KLLILPSPST EALRKLLPHF KKKSGIDVTL
DVRSFDEMYC LFDELDQHPD VDIIRIDMAS LPWFAPSILR PLKQLNLDLT KLLNHYAKQV
TERFTYLNGE AYAVPFDPSI QMLFYRQDLF DDPLIKRQYF EKYRRNLDVP TDFEQFTQIS
EFFNRQHNVD SPIEFGGGIT LGNTEIIASE FLLRYYANGG QLIEHDQIVL DKSIAMKTLV
ELAKFMSSAH HLEAAWWQAS VEQFERGDLA MLIIYMNLFS YISTKNILPL IGCAPVPGNR
PLFGGGSLGM SRYSDKITEV SQFFDWIFSK EISEQIALLG GSVAQDCLFQ NQKIMHHYPW
FNLVQQNYVH GVRENQLNNG QSINLRQVER IIGEHITLWL TAKCDSELII DYLNHELKRQ
LSSICS
//
