ID A0A498IP68_MALDO Unreviewed; 861 AA.
AC A0A498IP68;
DT 05-JUN-2019, integrated into UniProtKB/TrEMBL.
DT 05-JUN-2019, sequence version 1.
DT 24-JAN-2024, entry version 14.
DE RecName: Full=MIF4G domain-containing protein {ECO:0000259|SMART:SM00543};
GN ORFNames=DVH24_013160 {ECO:0000313|EMBL:RXH83915.1};
OS Malus domestica (Apple) (Pyrus malus).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Malus.
OX NCBI_TaxID=3750 {ECO:0000313|EMBL:RXH83915.1, ECO:0000313|Proteomes:UP000290289};
RN [1] {ECO:0000313|EMBL:RXH83915.1, ECO:0000313|Proteomes:UP000290289}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. HFTH1 {ECO:0000313|Proteomes:UP000290289};
RC TISSUE=Young leaf {ECO:0000313|EMBL:RXH83915.1};
RA Hu J.;
RT "A high-quality apple genome assembly.";
RL Submitted (OCT-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the NCBP1 family.
CC {ECO:0000256|ARBA:ARBA00007413}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RXH83915.1}.
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DR EMBL; RDQH01000337; RXH83915.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A498IP68; -.
DR STRING; 3750.A0A498IP68; -.
DR Proteomes; UP000290289; Chromosome 11.
DR GO; GO:0005846; C:nuclear cap binding complex; IEA:InterPro.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0000339; F:RNA cap binding; IEA:InterPro.
DR GO; GO:0006406; P:mRNA export from nucleus; IEA:InterPro.
DR GO; GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
DR GO; GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
DR Gene3D; 1.25.40.180; -; 3.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR027159; CBP80.
DR InterPro; IPR015172; MIF4G-like_typ-1.
DR InterPro; IPR015174; MIF4G-like_typ-2.
DR InterPro; IPR003890; MIF4G-like_typ-3.
DR PANTHER; PTHR12412; CAP BINDING PROTEIN; 1.
DR PANTHER; PTHR12412:SF2; NUCLEAR CAP-BINDING PROTEIN SUBUNIT 1; 1.
DR Pfam; PF02854; MIF4G; 1.
DR Pfam; PF09088; MIF4G_like; 1.
DR Pfam; PF09090; MIF4G_like_2; 1.
DR SMART; SM00543; MIF4G; 1.
DR SUPFAM; SSF48371; ARM repeat; 4.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW mRNA processing {ECO:0000256|ARBA:ARBA00022664};
KW mRNA splicing {ECO:0000256|ARBA:ARBA00023187};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000290289}.
FT DOMAIN 5..205
FT /note="MIF4G"
FT /evidence="ECO:0000259|SMART:SM00543"
FT COILED 656..720
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 861 AA; 98011 MW; 00A214AA9E052A76 CRC64;
MSSWKSLLLR IGEKSSDYGT SDDVKEHIET CYGVLRRELE HSPDDVSQFL IQCAEQLPHK
SPLYGTVDAL ASGNCNKIRI LMRFLTVMMC SKVIHPSSLV VVFETLLSSA ATTVDEEKGN
PSWQSRADFY ITCILSCLPW GGAELIEQVP EEIERVMVGV EAYLSIRKHS SDTGLSFFED
DDENAREPSD KDFLEDLWGR IQVLSSNGWK LDSVPRPHLS FEAQLVAGKS HEFGPISCPD
QPAMPSTMSN ITYGKQKHDA EFIYPQRIRR LNIFPESKTE DVQPMDRFIV EDRKECASYM
AGLPVPFRYE YLMAETIFSQ LLMLPQPPFR PIYYTLVIID LCKALPGAFP AVVAGAVRAL
FDKIADLDME CQTRLILWFS HHLSNFQFIW PWEEWAHVLD LPKWAPQRVF VQEVLEREVR
LSYWDKVKQS IEHAPGLEEL LPPKGAPNFK FSVEETSEGN ELNALSSDLR NMVKARASAR
EMIVWIEESV FPVHGMEVTL NVVVQTLLDI GSKSFTHLIT VLERYGQVIA KLCADQDKQV
MLINEVDSYW RNNSQMTAIA IDRMMGYRLL SNLAIVRWVF LPANIEQFHI SDRPWELFRE
FGISWVLPMD CYPFMVEKHK VPGKWKKAKI LRNAVGKTYN RVCDLRKEIS SMKKSVVSAE
EAAATVKAEL EASESKLSLM DGEPVMGENP GRLKRLKSRA EKAKEDAVSV RESLEAKEAL
LARSLDEFEA LFFSLYKNFL NALTERLPEA SKCVTLQGLK GIHADSMAVD HEESSAMDVD
NENRIPKKSE LNGGKTSNVY NVGEKEQWCL STLGYLKAFS RQYASEIWPH MEKLDEEVLT
EDVHPLIRKS VYCGLRRATD G
//