ID A0A498LKM7_LABRO Unreviewed; 716 AA.
AC A0A498LKM7;
DT 05-JUN-2019, integrated into UniProtKB/TrEMBL.
DT 05-JUN-2019, sequence version 1.
DT 24-JAN-2024, entry version 11.
DE SubName: Full=Liprin-alpha-1-like isoform X1 {ECO:0000313|EMBL:RXN08968.1};
GN ORFNames=ROHU_035301 {ECO:0000313|EMBL:RXN08968.1};
OS Labeo rohita (Indian major carp) (Cyprinus rohita).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Cyprinidae; Labeoninae; Labeonini; Labeo.
OX NCBI_TaxID=84645 {ECO:0000313|EMBL:RXN08968.1, ECO:0000313|Proteomes:UP000290572};
RN [1] {ECO:0000313|EMBL:RXN08968.1, ECO:0000313|Proteomes:UP000290572}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DASCIFA01 {ECO:0000313|EMBL:RXN08968.1};
RC TISSUE=Testis {ECO:0000313|EMBL:RXN08968.1};
RA Das P., Kushwaha B., Joshi C.G., Kumar D., Nagpure N.S., Sahoo L.,
RA Das S.P., Bit A., Patnaik S., Meher P.K., Jayasankar P., Koringa P.G.,
RA Patel N.V., Hinsu A.T., Kumar R., Pandey M., Agarwal S., Srivastava S.,
RA Singh M., Iquebal M.A., Jaiswal S., Angadi U.B., Kumar N., Raza M.,
RA Shah T.M., Rai A., Jena J.K.;
RT "Draft genome sequence of Rohu Carp (Labeo rohita).";
RL Submitted (MAR-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the liprin family. Liprin-alpha subfamily.
CC {ECO:0000256|ARBA:ARBA00007026}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RXN08968.1}.
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DR EMBL; QBIY01013297; RXN08968.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A498LKM7; -.
DR STRING; 84645.A0A498LKM7; -.
DR Proteomes; UP000290572; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProt.
DR CDD; cd09562; SAM_liprin-alpha1_2_3_4_repeat1; 1.
DR CDD; cd09565; SAM_liprin-alpha1_2_3_4_repeat2; 1.
DR CDD; cd09568; SAM_liprin-alpha1_2_3_4_repeat3; 1.
DR Gene3D; 2.10.60.10; CD59; 1.
DR Gene3D; 1.10.150.50; Transcription Factor, Ets-1; 3.
DR InterPro; IPR029515; Liprin.
DR InterPro; IPR037620; Liprin-alpha_SAM_rpt_1.
DR InterPro; IPR037621; Liprin-alpha_SAM_rpt_2.
DR InterPro; IPR037622; Liprin-alpha_SAM_rpt_3.
DR InterPro; IPR001660; SAM.
DR InterPro; IPR013761; SAM/pointed_sf.
DR InterPro; IPR045860; Snake_toxin-like_sf.
DR PANTHER; PTHR12587; LAR INTERACTING PROTEIN LIP -RELATED PROTEIN; 1.
DR PANTHER; PTHR12587:SF15; LIPRIN-ALPHA-1; 1.
DR Pfam; PF00536; SAM_1; 2.
DR Pfam; PF07647; SAM_2; 1.
DR SMART; SM00454; SAM; 3.
DR SUPFAM; SSF47769; SAM/Pointed domain; 3.
DR SUPFAM; SSF57302; Snake toxin-like; 1.
DR PROSITE; PS50105; SAM_DOMAIN; 3.
PE 1: Evidence at protein level;
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054};
KW Proteomics identification {ECO:0007829|PeptideAtlas:A0A498LKM7};
KW Reference proteome {ECO:0000313|Proteomes:UP000290572}.
FT DOMAIN 252..318
FT /note="SAM"
FT /evidence="ECO:0000259|PROSITE:PS50105"
FT DOMAIN 344..392
FT /note="SAM"
FT /evidence="ECO:0000259|PROSITE:PS50105"
FT DOMAIN 397..429
FT /note="SAM"
FT /evidence="ECO:0000259|PROSITE:PS50105"
FT REGION 1..68
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 116..226
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..24
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 28..60
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 132..146
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 151..169
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 716 AA; 78958 MW; 11D7B70F04A21863 CRC64;
MIQEEKESTA MRAEEIESRV GSGDDLGSRF RSMTSLPPSF HSSSHAESSP PGSGHSTPRR
PSRSPSRELD RMGVMTLHYR SEPCVLRGVA YSSSLLTCAP VFVQCAQDDK ATIRCETSPP
STPSSMRLHK GALHTASHED IRDVRGTGLQ DGAGSNPSSS NSSQDSLNKG AKKKSIKSSI
GRLFAKKEKG RPSPVGKESP GPALAGTPDG GSTQDGMTLG KLGGPAEKNR KLQKKHELLE
EACRQGLPFA QWDGPTVVVW LELWVGMPAW YVAACRANVK SGAIMSALSD TEIQREIGIS
NPLHRLKLRL AIQEIMSLTS PSAPPTSRTT LAYGDMNHEW IGNDWLPSLG LPQYRSYFME
SLVDARMLDH LTKKDLRSQL KMVDSFHREH LIYVLVWTNE RVVSWVQAIG LKEYAGNLLE
SGVHGALIAL DESFDHNALA LLLQIPTQCT QARALLENEY GCLLATGTER RLEEDDDKNF
RRAPSWRKKF RPKDVRGLSV SSADTLPPSF RETRVFSVWI QPQSEPTPAD LTQVKQKQTS
PHQAGVSENE HWFGFSCYRP VIPSELCPTS RNFRFDASMS SLMQTVLAIS LVSVFELLYA
GRSGAVLQCH YCPLQAAGRR CNITTECRAH ERCSSGWRRY GGVYLLAVQG CASTELCGSN
QTLSYKGFEY KITYTCCCRD LCNKAASSEN NLKQLLRITI SPADNITADP LSCPND
//
