ID A0A498LQN2_LABRO Unreviewed; 609 AA.
AC A0A498LQN2;
DT 05-JUN-2019, integrated into UniProtKB/TrEMBL.
DT 05-JUN-2019, sequence version 1.
DT 27-MAR-2024, entry version 13.
DE SubName: Full=Type I cytoskeletal 19-like protein {ECO:0000313|EMBL:RXN10738.1};
GN ORFNames=ROHU_010815 {ECO:0000313|EMBL:RXN10738.1};
OS Labeo rohita (Indian major carp) (Cyprinus rohita).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Cyprinidae; Labeoninae; Labeonini; Labeo.
OX NCBI_TaxID=84645 {ECO:0000313|EMBL:RXN10738.1, ECO:0000313|Proteomes:UP000290572};
RN [1] {ECO:0000313|EMBL:RXN10738.1, ECO:0000313|Proteomes:UP000290572}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DASCIFA01 {ECO:0000313|EMBL:RXN10738.1};
RC TISSUE=Testis {ECO:0000313|EMBL:RXN10738.1};
RA Das P., Kushwaha B., Joshi C.G., Kumar D., Nagpure N.S., Sahoo L.,
RA Das S.P., Bit A., Patnaik S., Meher P.K., Jayasankar P., Koringa P.G.,
RA Patel N.V., Hinsu A.T., Kumar R., Pandey M., Agarwal S., Srivastava S.,
RA Singh M., Iquebal M.A., Jaiswal S., Angadi U.B., Kumar N., Raza M.,
RA Shah T.M., Rai A., Jena J.K.;
RT "Draft genome sequence of Rohu Carp (Labeo rohita).";
RL Submitted (MAR-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the intermediate filament family.
CC {ECO:0000256|RuleBase:RU000685}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RXN10738.1}.
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DR EMBL; QBIY01013174; RXN10738.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A498LQN2; -.
DR STRING; 84645.A0A498LQN2; -.
DR Proteomes; UP000290572; Unassembled WGS sequence.
DR GO; GO:0005882; C:intermediate filament; IEA:UniProtKB-KW.
DR GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR Gene3D; 1.20.5.170; -; 1.
DR Gene3D; 1.20.5.500; Single helix bin; 1.
DR Gene3D; 1.20.5.1160; Vasodilator-stimulated phosphoprotein; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR018039; IF_conserved.
DR InterPro; IPR039008; IF_rod_dom.
DR InterPro; IPR002957; Keratin_I.
DR PANTHER; PTHR23239; INTERMEDIATE FILAMENT; 1.
DR PANTHER; PTHR23239:SF14; KERATIN, TYPE I CYTOSKELETAL 19; 1.
DR Pfam; PF00038; Filament; 1.
DR PRINTS; PR01248; TYPE1KERATIN.
DR SMART; SM01391; Filament; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF64593; Intermediate filament protein, coiled coil region; 2.
DR PROSITE; PS00226; IF_ROD_1; 1.
DR PROSITE; PS51842; IF_ROD_2; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054, ECO:0000256|SAM:Coils};
KW Intermediate filament {ECO:0000256|ARBA:ARBA00022754,
KW ECO:0000256|RuleBase:RU000685};
KW Reference proteome {ECO:0000313|Proteomes:UP000290572}.
FT DOMAIN 134..445
FT /note="IF rod"
FT /evidence="ECO:0000259|PROSITE:PS51842"
FT COILED 138..208
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 300..416
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 609 AA; 65344 MW; A4C35FB5F0BBC1ED CRC64;
MSCKGAKTSC MTSKSIISKG RCGFPRKAYS ICGGSTRSSC SFRTGGYGKG FGGGHGLGRG
CGFGGGYGLG KGSGFGGRSG FSGGSVFGGG CGFGGRSGFS GGCEFVGVFG HGGGSGFGGG
SSFGGGYGGF VGGEKATLQN LNDRLASYLD MVRSLESANA VLERQIREYY ERKAAIPQRD
YTHYLCEIKD LQNKITIATT ENANLLLQID NSKLAADDFR TKYEHEVVMR QYVEADIANL
RRLLDQTNMA KCELEMQLRS LEDELACMHK NHQEELCALR AQLTGTVNVE VDAAPQEDLK
KVLQEIRAHY ENIIQRHRRE QEEWFNDQMA GLNKEMEKST EDMAKYRTEI TDLRTTLKSL
EIELQSQISM VAALEKSLME TEASYSSMLA CFQNQINMLE AELAQLRASI EQQGRDYAVL
LDIKTRLEQE IATYRCLLEK QDIKCPIPAS SCGSIVGTCG VSQSSGGSLR GQCGVPQSSC
GSQLGTSGGS QSSGGSNVGT CGVSQSSGGS QFVPSGGSQS SCGSQFVPSS GSQSSCGAAN
LKKIERLPHG GGRTGMFSPH QETLIVDMVR ENNAIKLSEI QQKIIEDHVN FEGINSVSLS
TVDRVLKRN
//
