ID A0A498LSL0_LABRO Unreviewed; 638 AA.
AC A0A498LSL0;
DT 05-JUN-2019, integrated into UniProtKB/TrEMBL.
DT 05-JUN-2019, sequence version 1.
DT 27-MAR-2024, entry version 10.
DE SubName: Full=ATP-dependent DNA helicase PIF1 {ECO:0000313|EMBL:RXN10653.1};
GN ORFNames=ROHU_030493 {ECO:0000313|EMBL:RXN10653.1};
OS Labeo rohita (Indian major carp) (Cyprinus rohita).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Cyprinidae; Labeoninae; Labeonini; Labeo.
OX NCBI_TaxID=84645 {ECO:0000313|EMBL:RXN10653.1, ECO:0000313|Proteomes:UP000290572};
RN [1] {ECO:0000313|EMBL:RXN10653.1, ECO:0000313|Proteomes:UP000290572}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DASCIFA01 {ECO:0000313|EMBL:RXN10653.1};
RC TISSUE=Testis {ECO:0000313|EMBL:RXN10653.1};
RA Das P., Kushwaha B., Joshi C.G., Kumar D., Nagpure N.S., Sahoo L.,
RA Das S.P., Bit A., Patnaik S., Meher P.K., Jayasankar P., Koringa P.G.,
RA Patel N.V., Hinsu A.T., Kumar R., Pandey M., Agarwal S., Srivastava S.,
RA Singh M., Iquebal M.A., Jaiswal S., Angadi U.B., Kumar N., Raza M.,
RA Shah T.M., Rai A., Jena J.K.;
RT "Draft genome sequence of Rohu Carp (Labeo rohita).";
RL Submitted (MAR-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RXN10653.1}.
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DR EMBL; QBIY01013186; RXN10653.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A498LSL0; -.
DR STRING; 84645.A0A498LSL0; -.
DR Proteomes; UP000290572; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
DR Gene3D; 1.20.5.1000; arf6 gtpase in complex with a specific effector, jip4; 1.
DR Gene3D; 3.60.10.10; Endonuclease/exonuclease/phosphatase; 1.
DR Gene3D; 3.10.100.10; Mannose-Binding Protein A, subunit A; 2.
DR InterPro; IPR001304; C-type_lectin-like.
DR InterPro; IPR016186; C-type_lectin-like/link_sf.
DR InterPro; IPR016187; CTDL_fold.
DR InterPro; IPR036691; Endo/exonu/phosph_ase_sf.
DR InterPro; IPR005135; Endo/exonuclease/phosphatase.
DR PANTHER; PTHR47642; ATP-DEPENDENT DNA HELICASE; 1.
DR PANTHER; PTHR47642:SF7; ATP-DEPENDENT DNA HELICASE; 1.
DR Pfam; PF03372; Exo_endo_phos; 1.
DR Pfam; PF00059; Lectin_C; 2.
DR SMART; SM00034; CLECT; 2.
DR SUPFAM; SSF56436; C-type lectin-like; 2.
DR SUPFAM; SSF56219; DNase I-like; 1.
DR PROSITE; PS50041; C_TYPE_LECTIN_2; 2.
PE 4: Predicted;
KW ATP-binding {ECO:0000313|EMBL:RXN10653.1};
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Helicase {ECO:0000313|EMBL:RXN10653.1};
KW Hydrolase {ECO:0000313|EMBL:RXN10653.1};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Nucleotide-binding {ECO:0000313|EMBL:RXN10653.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000290572};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 435..458
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 330..429
FT /note="C-type lectin"
FT /evidence="ECO:0000259|PROSITE:PS50041"
FT DOMAIN 565..631
FT /note="C-type lectin"
FT /evidence="ECO:0000259|PROSITE:PS50041"
FT COILED 299..333
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 492..558
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 638 AA; 72560 MW; BAAA5371F4233031 CRC64;
MTTDRAVVSL KHIFEPGMAY VALSRTTSLS GLHITDFDEK KIFCNPEISA SLDNMPKADF
HNIQPILHIV QDTKMSSALK IIHHNTEGLE SHMDDLKCHH ELLSADVLCL TETHLSGSAV
PAYLQLDGYT MYKRNRHASY TNYVHLANKN GGGVAIYVKN NFQVSPVMYI QNVTDLEYLV
LKIEAPKQAL IVVIYRPPSY NLAEFLANLN ALLTSLEIID FKPVIVCGDF NEDQLSHRNK
PILNLFEDKG YIQLISTGTT ENNTLLDPVF ISGINSSHIS FTAEKDLFKN YKNVFSQKNN
RLQDTCSDLM TEKDQLQGRF NDLSNELKAY KKRFQWFFVS DFSKSWSESR QYCKDRGADL
VIINTEEKQR FITSIISGNE KVWIGLSDTY QEGNMEWVDG SPLKQGDTEC RTLPQTPSQS
QDAGKAKKCR GCGCLVSMAI AMCFTLLICA VLVVFIILQH TSITAERESQ SKNYKEAVQV
FNQTNSMLQG TNSHLMTENN QLQERFSNLS DELYKAVQVF NQTNSILQGT NSHLMTENTQ
LQEKFNDLSD ELKKAYQKGW FSGQFFLSNV SKSWSESRQY CKDQGGDLVI IKTEIKQNYL
TSYISDNERV WIGLTDTRQE GKMEWVDNSP LKQGKQAR
//
