ID A0A498LWD5_LABRO Unreviewed; 1489 AA.
AC A0A498LWD5;
DT 05-JUN-2019, integrated into UniProtKB/TrEMBL.
DT 05-JUN-2019, sequence version 1.
DT 27-MAR-2024, entry version 17.
DE SubName: Full=Zinc finger protein 473-like isoform X2 {ECO:0000313|EMBL:RXN12799.1};
GN ORFNames=ROHU_029252 {ECO:0000313|EMBL:RXN12799.1};
OS Labeo rohita (Indian major carp) (Cyprinus rohita).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Cyprinidae; Labeoninae; Labeonini; Labeo.
OX NCBI_TaxID=84645 {ECO:0000313|EMBL:RXN12799.1, ECO:0000313|Proteomes:UP000290572};
RN [1] {ECO:0000313|EMBL:RXN12799.1, ECO:0000313|Proteomes:UP000290572}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DASCIFA01 {ECO:0000313|EMBL:RXN12799.1};
RC TISSUE=Testis {ECO:0000313|EMBL:RXN12799.1};
RA Das P., Kushwaha B., Joshi C.G., Kumar D., Nagpure N.S., Sahoo L.,
RA Das S.P., Bit A., Patnaik S., Meher P.K., Jayasankar P., Koringa P.G.,
RA Patel N.V., Hinsu A.T., Kumar R., Pandey M., Agarwal S., Srivastava S.,
RA Singh M., Iquebal M.A., Jaiswal S., Angadi U.B., Kumar N., Raza M.,
RA Shah T.M., Rai A., Jena J.K.;
RT "Draft genome sequence of Rohu Carp (Labeo rohita).";
RL Submitted (MAR-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RXN12799.1}.
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DR EMBL; QBIY01013025; RXN12799.1; -; Genomic_DNA.
DR STRING; 84645.A0A498LWD5; -.
DR Proteomes; UP000290572; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR Gene3D; 3.30.160.60; Classic Zinc Finger; 5.
DR InterPro; IPR003656; Znf_BED.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR InterPro; IPR013087; Znf_C2H2_type.
DR PANTHER; PTHR24388:SF101; PROTEIN ESCARGOT; 1.
DR PANTHER; PTHR24388; ZINC FINGER PROTEIN; 1.
DR Pfam; PF02892; zf-BED; 1.
DR Pfam; PF00096; zf-C2H2; 2.
DR SMART; SM00614; ZnF_BED; 1.
DR SMART; SM00355; ZnF_C2H2; 8.
DR SUPFAM; SSF57667; beta-beta-alpha zinc fingers; 6.
DR PROSITE; PS50808; ZF_BED; 1.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 6.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 6.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000290572};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00042}.
FT DOMAIN 204..231
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 395..422
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 447..475
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 616..643
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 1143..1170
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 1171..1199
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 1419..1467
FT /note="BED-type"
FT /evidence="ECO:0000259|PROSITE:PS50808"
FT REGION 80..103
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 262..315
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 506..529
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 547..762
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 861..906
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1000..1101
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1362..1388
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 88..103
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 268..283
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 286..315
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 512..529
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 547..594
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 595..617
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 629..648
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 649..677
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 692..706
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 709..756
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1001..1018
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1019..1075
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1076..1097
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1489 AA; 166261 MW; 236AA0E268142326 CRC64;
MAFALQQNGG VSPGRDKKKY KMTKLQLLHR ALNERLMAAV EQIMEMVGGT VLEYEEETIR
ARKENEVLRR RLRWMEGANR ADWPGPSEPV TLSTTDETNS SRQDECAVNF GIGQESEGFV
IKTESTELPL CVRPESSITT LPQSIDQGSD NAGTAVGIAY GLADSMPWDS PQSYMAPLDF
DPTGSGPNRV RHWRGRNRRQ RMSFACPDCG KVFGTEQRLM VHMRIHSTER PYAYRRRKAC
FYGDSKKKRK LHRLSQLSRE IVDDLSDGSE QTNRSSASPE QLETTAPGRE EPESDDNSSD
KEPEKRITSP VRNQRDKKRV VNQMCYCPQC PKRAFARPCQ LAMHMKTHTV TDLVNLPTQA
QSGTEAIVDV KRKLPKKQRK KDVKKKAKVG GIGEYRCPEC DRVFSLASRL HFHMKTHTSK
RALLCKAQQI KTELEAVAKT TDIHRPYACP HCDKLFAREG WLAPHIRTQH GEIKSRSNYF
KIMYGSGRTR SQQTFTKVVR LATVAKDEDE QSEDIPITDT DEDEQSEDLP IMGTDEAELS
VDLSKMGTDE AQQSEDLPET GTDEAQQSAD LPETGTDETQ QSADLPITGT DEPESISEQS
KDTSGQKEEE RRKKGFPCKT CGKSFVLEKK LKKHSRKHVG KKIHDVRKRK REQALMETKL
REQEQRRREE SERLEAKMST SNRNSNTTPS GDKSDESEES VSEEMANKDG SAHLSSSATH
TVSGSPASST ETIAAANHTG SPGLLPQTAI EQPTTSYKRN ERTKPEMVSN IMSHFNMQPR
IVLQPIRTER KYWGSMPGVA DLKSSCSEKS SGLYSVVVDD EMADAVQDKI VDSNLCTLPV
EFSGHGSQNT VDPETEIVSV EVGSSQRDSD VELENTGGPL PIESSEGNKA EGQQKDNHNL
NLPGVSEKTA RNQVSLIVID DKLEQSYART AKENALSECG RSKCDWKCDC KNISGMKLTV
MPQSSVLESL FKETSSDTMQ KNIDSKVVCV VLSDIEDNVD EDVLGPSKGL DKKKRASVTS
IQNEQLDVGS KPGNNPSSNS NFPAPGAAES TKSIDGASQH ADDQSISNDP PRDQMTAIRQ
TEDRPMISKE RTSCETSDME VNADMEIVSG GERQNKKLGQ NNQSVIMGDD LLRAGEMSNS
RLHVCQHCKA AFGSSYTLRR HEYTHTGERP FWCNQCNMGF IQKYRLLKHT FACHGDTTSN
ADQEKLKRAT RTIQDGETSL NNEACIQSYQ PASPGQPGWI CIQNEEPEPF EEIQQDQSQR
LGEQHPFIKP EKPEYSVDAY RESVALPSKA NNNDGSHVCT DHSDTNPIED EMTNCHFPSK
IKVEFMNSSL CSGDAIGSTE DAYQSWSPHS PDLPLGTSDI YRAQHPNQPT YTNSEAPATV
SQHSSSSHDA SHVSYHNILC TNRAYCSSKC CEMQKRTIAK SSPVWKYFSL KEGDCSKAVC
LMCRAVISRG RKEYTTSALL KHLRMKHGNA LIFGCAQKRR MKEITRKTV
//
