ID A0A498NGH9_LABRO Unreviewed; 1048 AA.
AC A0A498NGH9;
DT 05-JUN-2019, integrated into UniProtKB/TrEMBL.
DT 05-JUN-2019, sequence version 1.
DT 27-MAR-2024, entry version 18.
DE SubName: Full=PHD finger 20-like isoform X1 {ECO:0000313|EMBL:RXN30931.1};
GN ORFNames=ROHU_036206 {ECO:0000313|EMBL:RXN30931.1};
OS Labeo rohita (Indian major carp) (Cyprinus rohita).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Cyprinidae; Labeoninae; Labeonini; Labeo.
OX NCBI_TaxID=84645 {ECO:0000313|EMBL:RXN30931.1, ECO:0000313|Proteomes:UP000290572};
RN [1] {ECO:0000313|EMBL:RXN30931.1, ECO:0000313|Proteomes:UP000290572}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DASCIFA01 {ECO:0000313|EMBL:RXN30931.1};
RC TISSUE=Testis {ECO:0000313|EMBL:RXN30931.1};
RA Das P., Kushwaha B., Joshi C.G., Kumar D., Nagpure N.S., Sahoo L.,
RA Das S.P., Bit A., Patnaik S., Meher P.K., Jayasankar P., Koringa P.G.,
RA Patel N.V., Hinsu A.T., Kumar R., Pandey M., Agarwal S., Srivastava S.,
RA Singh M., Iquebal M.A., Jaiswal S., Angadi U.B., Kumar N., Raza M.,
RA Shah T.M., Rai A., Jena J.K.;
RT "Draft genome sequence of Rohu Carp (Labeo rohita).";
RL Submitted (MAR-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RXN30931.1}.
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DR EMBL; QBIY01011541; RXN30931.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A498NGH9; -.
DR STRING; 84645.A0A498NGH9; -.
DR Proteomes; UP000290572; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd20104; MBT_PHF20L1-like; 1.
DR CDD; cd20453; Tudor_PHF20; 1.
DR Gene3D; 2.30.30.140; -; 2.
DR Gene3D; 3.30.160.60; Classic Zinc Finger; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR041297; Crb2_Tudor.
DR InterPro; IPR004092; Mbt.
DR InterPro; IPR043449; PHF20-like.
DR InterPro; IPR002999; Tudor.
DR InterPro; IPR019786; Zinc_finger_PHD-type_CS.
DR InterPro; IPR013087; Znf_C2H2_type.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR001965; Znf_PHD.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR15856:SF27; PHD FINGER PROTEIN 20; 1.
DR PANTHER; PTHR15856; PHD FINGER PROTEIN 20-RELATED; 1.
DR Pfam; PF02820; MBT; 1.
DR Pfam; PF20826; PHD_5; 1.
DR Pfam; PF18115; Tudor_3; 1.
DR SMART; SM00249; PHD; 1.
DR SMART; SM00333; TUDOR; 2.
DR SUPFAM; SSF57903; FYVE/PHD zinc finger; 1.
DR SUPFAM; SSF63748; Tudor/PWWP/MBT; 2.
DR PROSITE; PS01359; ZF_PHD_1; 1.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 1.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 1.
PE 4: Predicted;
KW Acetylation {ECO:0000256|ARBA:ARBA00022990};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000290572};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00042}.
FT DOMAIN 439..469
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT REGION 156..412
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 464..542
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 577..597
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 625..652
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 156..184
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 238..329
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 337..360
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 499..514
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 528..542
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 631..645
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1048 AA; 119786 MW; 5A1C31BF47EAF147 CRC64;
MNALSGCVYD RLVCDCVTSM TKSPPHRRGI TFEVGAQLEA RDSLKNWYAA SIEKIDYEDE
KVLIHYRQWS HRYDEWFDWS SPYLRPVERI QLRRQGLPER QSAPGFHVNQ KVLASWSDCR
YYPAKILSRD KDGFYTVKFF DGVIKTVKGI KVKPFRKERS DSKTNQQIRK RGDQNGKKWK
AKENGNSRSN GSRHSTSDQE GESESEEDEE DATVIDESRN LQNGGESEST APKILHESEP
STAEHNEEQP SEDKKTEPLE NGEANKPEEK EMNGEQEESK ALQNGVDKID GDKKEKEDTT
DESPSQPRRT RSKMADGKDV EKPNGPELRK RRASTGQMPP SKRSRANSST DKNSRPQIKP
VKSDSVPEPS ESKDSPTSPV ENAAPKEEAG STPDLAPAVK QPQTVHLPTT NKYSREPLYR
VIKNQPPPIL SIELDHNPFK CKIAGCLKSF RKASLLHYHM KYYHAQSDPS PPRCVQTRSS
EKQNHSQETP RRRRTVSASH HTPSPLSDSK SGLSPPAVGS MHRQRSATLG AERSKENQHF
NRSLHDDRDW VAKETGVKER ERLREKRQRD FFRIKLKKKK KKKRKSKSDC YSTEESIGPK
PLPCNLNSAH KLPLSLTHRS YTGHCPEKML SQGEESSSDL SSDSPIWSED ESDAELDLNM
PLSEQGVETV THGSEIVRCI CEVQEENDFM IQCDECLCWQ HGTCMGLYED SVPDSYSCYI
CRDPPAQRQS QRYWYDKDWL SSGHMYGLSF LEENYSHQNS KKVTAAHQLL GDVHRVFEVL
NGLQLKMSIL QTQAHPDLKF WRQPWKSADG LRRKMAGDSG IATPFPSSPP EMGVNEFETL
KSEVPSPVET HCSFQDSYIS SEHCYQKPRT YYPAVERRLV VETRCGSELE DSLRSTEDLL
EMAEQRYGTP LDHDQHKLQL ADRSFSKELE CRMKRLVSAE QEKSCVVEIK EEEPDPVTPD
PKPDPDLVLH QQWQLNLLEH IEAVQDEVTH RMDLIERELD VLESWLDYTG ELEPPDPLAR
LPQLKHRIRQ LLTDLGTVQQ IALCSSSS
//
