ID A0A498NIV5_LABRO Unreviewed; 286 AA.
AC A0A498NIV5;
DT 05-JUN-2019, integrated into UniProtKB/TrEMBL.
DT 05-JUN-2019, sequence version 1.
DT 22-FEB-2023, entry version 10.
DE SubName: Full=C1q-related factor-like protein {ECO:0000313|EMBL:RXN31768.1};
GN ORFNames=ROHU_015782 {ECO:0000313|EMBL:RXN33183.1}, ROHU_016644
GN {ECO:0000313|EMBL:RXN31768.1};
OS Labeo rohita (Indian major carp) (Cyprinus rohita).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Cyprinidae; Labeoninae; Labeonini; Labeo.
OX NCBI_TaxID=84645 {ECO:0000313|EMBL:RXN31768.1, ECO:0000313|Proteomes:UP000290572};
RN [1] {ECO:0000313|EMBL:RXN31768.1, ECO:0000313|Proteomes:UP000290572}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DASCIFA01 {ECO:0000313|EMBL:RXN31768.1};
RC TISSUE=Testis {ECO:0000313|EMBL:RXN31768.1};
RA Das P., Kushwaha B., Joshi C.G., Kumar D., Nagpure N.S., Sahoo L.,
RA Das S.P., Bit A., Patnaik S., Meher P.K., Jayasankar P., Koringa P.G.,
RA Patel N.V., Hinsu A.T., Kumar R., Pandey M., Agarwal S., Srivastava S.,
RA Singh M., Iquebal M.A., Jaiswal S., Angadi U.B., Kumar N., Raza M.,
RA Shah T.M., Rai A., Jena J.K.;
RT "Draft genome sequence of Rohu Carp (Labeo rohita).";
RL Submitted (MAR-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RXN31768.1}.
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DR EMBL; QBIY01011439; RXN31768.1; -; Genomic_DNA.
DR EMBL; QBIY01011292; RXN33183.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A498NIV5; -.
DR STRING; 84645.A0A498NIV5; -.
DR Proteomes; UP000290572; Unassembled WGS sequence.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-KW.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR Gene3D; 2.60.120.40; -; 1.
DR InterPro; IPR001073; C1q_dom.
DR InterPro; IPR008160; Collagen.
DR InterPro; IPR008983; Tumour_necrosis_fac-like_dom.
DR PANTHER; PTHR22923:SF64; C1Q-RELATED FACTOR; 1.
DR PANTHER; PTHR22923; CEREBELLIN-RELATED; 1.
DR Pfam; PF00386; C1q; 1.
DR Pfam; PF01391; Collagen; 1.
DR PRINTS; PR00007; COMPLEMNTC1Q.
DR SMART; SM00110; C1Q; 1.
DR SUPFAM; SSF49842; TNF-like; 1.
DR PROSITE; PS50871; C1Q; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000290572};
KW Secreted {ECO:0000256|ARBA:ARBA00022525};
KW Signal {ECO:0000256|ARBA:ARBA00022729};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 16..37
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 153..286
FT /note="C1q"
FT /evidence="ECO:0000259|PROSITE:PS50871"
FT REGION 80..142
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 104..127
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 286 AA; 29998 MW; 10DDFA8CBCBBC6CF CRC64;
MAAQPLPRLS LGRKTLVAAA VGVMLVLVLV VLIPVLVSSV SNDNSHYEML GTCRMVCDPY
QNKGTSTGIA STGSSVQAEA EALADHSNMP PPSTLLQGPQ GKPGRPGKPG PPGPPGEPGP
PGPMGPPGDR GDRGRSGVLS LGNDGAISTV TYNTHPRVAF YAGLKNPHEG YEILKFDDVV
TNLGNNYDGT SGKFICSVPG TYFFIYHVLM RGGDGTSMWA DLCKNGQVRA SAIAQDADQN
YDYASNSVIL HLDAGDEVYI KLDGGKAHGG NNNKYSTFSG FILYAD
//
