ID A0A4S2KDU4_9HYME Unreviewed; 1819 AA.
AC A0A4S2KDU4;
DT 31-JUL-2019, integrated into UniProtKB/TrEMBL.
DT 31-JUL-2019, sequence version 1.
DT 27-MAR-2024, entry version 19.
DE RecName: Full=Transcription initiation factor TFIID subunit 5 {ECO:0000256|ARBA:ARBA00044130};
DE Flags: Fragment;
GN ORFNames=DBV15_02743 {ECO:0000313|EMBL:TGZ45917.1};
OS Temnothorax longispinosus.
OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota;
OC Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea;
OC Formicidae; Myrmicinae; Temnothorax.
OX NCBI_TaxID=300112 {ECO:0000313|EMBL:TGZ45917.1, ECO:0000313|Proteomes:UP000310200};
RN [1] {ECO:0000313|EMBL:TGZ45917.1, ECO:0000313|Proteomes:UP000310200}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC TISSUE=Whole body {ECO:0000313|EMBL:TGZ45917.1};
RX PubMed=30967075;
RA Kaur R., Stoldt M., Jongepier E., Feldmeyer B., Menzel F.,
RA Bornberg-Bauer E., Foitzik S.;
RT "Ant behaviour and brain gene expression of defending hosts depend on the
RT ecological success of the intruding social parasite.";
RL Philos. Trans. R. Soc. Lond., B, Biol. Sci. 374:20180192-20180192(2019).
CC -!- SIMILARITY: Belongs to the WD repeat TAF5 family.
CC {ECO:0000256|ARBA:ARBA00009435}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:TGZ45917.1}.
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DR EMBL; QBLH01003027; TGZ45917.1; -; Genomic_DNA.
DR STRING; 300112.A0A4S2KDU4; -.
DR Proteomes; UP000310200; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
DR CDD; cd09366; LIM1_Isl; 1.
DR CDD; cd09374; LIM2_Isl; 1.
DR CDD; cd11849; SH3_SPIN90; 1.
DR CDD; cd08044; TAF5_NTD2; 1.
DR CDD; cd00200; WD40; 1.
DR Gene3D; 2.10.110.10; Cysteine Rich Protein; 2.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 2.30.30.40; SH3 Domains; 1.
DR Gene3D; 1.25.40.500; TFIID subunit TAF5, NTD2 domain; 2.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 2.
DR InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR001356; Homeobox_dom.
DR InterPro; IPR047244; ISL1/2-like_LIM1.
DR InterPro; IPR006594; LisH.
DR InterPro; IPR036028; SH3-like_dom_sf.
DR InterPro; IPR001452; SH3_domain.
DR InterPro; IPR018556; SPIN90/Ldb17_LRD.
DR InterPro; IPR035514; SPIN90_SH3.
DR InterPro; IPR007582; TFIID_NTD2.
DR InterPro; IPR037264; TFIID_NTD2_sf.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR InterPro; IPR001781; Znf_LIM.
DR PANTHER; PTHR19879:SF1; CANNONBALL-RELATED; 1.
DR PANTHER; PTHR19879; TRANSCRIPTION INITIATION FACTOR TFIID; 1.
DR Pfam; PF00412; LIM; 2.
DR Pfam; PF00018; SH3_1; 1.
DR Pfam; PF09431; SPIN90_LRD; 1.
DR Pfam; PF04494; TFIID_NTD2; 1.
DR Pfam; PF00400; WD40; 5.
DR PRINTS; PR00320; GPROTEINBRPT.
DR PRINTS; PR00452; SH3DOMAIN.
DR SMART; SM00389; HOX; 1.
DR SMART; SM00132; LIM; 2.
DR SMART; SM00326; SH3; 1.
DR SMART; SM00320; WD40; 6.
DR SUPFAM; SSF57716; Glucocorticoid receptor-like (DNA-binding domain); 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF50044; SH3-domain; 1.
DR SUPFAM; SSF160897; Taf5 N-terminal domain-like; 1.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS00478; LIM_DOMAIN_1; 1.
DR PROSITE; PS50023; LIM_DOMAIN_2; 1.
DR PROSITE; PS50896; LISH; 1.
DR PROSITE; PS50002; SH3; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 6.
DR PROSITE; PS50294; WD_REPEATS_REGION; 5.
PE 3: Inferred from homology;
KW Initiation factor {ECO:0000313|EMBL:TGZ45917.1};
KW LIM domain {ECO:0000256|ARBA:ARBA00023038, ECO:0000256|PROSITE-
KW ProRule:PRU00125}; Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00125};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Protein biosynthesis {ECO:0000313|EMBL:TGZ45917.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000310200};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW SH3 domain {ECO:0000256|ARBA:ARBA00022443, ECO:0000256|PROSITE-
KW ProRule:PRU00192};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}; Zinc {ECO:0000256|PROSITE-ProRule:PRU00125}.
FT DOMAIN 227..289
FT /note="LIM zinc-binding"
FT /evidence="ECO:0000259|PROSITE:PS50023"
FT REPEAT 731..764
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 804..839
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 846..887
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 888..929
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 930..971
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 972..1013
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT DOMAIN 1094..1156
FT /note="SH3"
FT /evidence="ECO:0000259|PROSITE:PS50002"
FT REGION 303..358
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 645..696
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1264..1339
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 303..331
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 645..670
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1819
FT /evidence="ECO:0000313|EMBL:TGZ45917.1"
SQ SEQUENCE 1819 AA; 205759 MW; D088B7224127DA7B CRC64;
MEAGERGTEE RSICSGMHSA LIALSASRIY TLLRAEPLKK PSFTLPLHET YPCPASRAAF
PIVKSRNFEA RCALPVAKMD DLLTLDIAEK RFFDSEWRRH AGRKFHEFKG YGRWSAYEGF
KIARKPSREV RRSGRAAEIG AAGVMQRVGA AGGPGPIGFQ GPPRSLKISP VNIQDEPADP
TQTPNLEWHA ACLKCAECQQ FLDEKCTCFV RDGKTYCKRD YVRLFGTKCD KCSQCFSKND
YVMRAKTKIY HVECFRCSAC MRRLETGDEF ALRQDGLFCR HDHDALEGGK HCTGVVGIPG
SENNNNASLT NNNHHLHPND GSMSDSGSES GSHKAGVGGV RGSGGHKSGG GSDGKPTRVR
TVLNEKQLHT LRTCYAANPR PDALMKEQLV EMTGLSPRVI RDGRKLGFGG MHGIPMVASS
PVRHESPIGM TPLEIIVNMD NEKSTMIAVL QLLKKYNFKG TEELFRKEAN LTDVSIDDAQ
QSDSDVTSVL SAYKSEGDPA QYEKAYSELK KFVEGALDIY KAKQLMEKFS GNLEEYYQDD
LKRLSNVTKR EQMAGNELTD TFKSNQFIIR MSRDTLSILK RHLQEKKYSV LLNIIQEHLY
FDMYEGVARN KQQIEATSGA LVGEATRQDN KAKVFYGLLK EPDIQPPAEE EEKCDDTGGG
DGDKPKKKKV KKDPLFSKKT KSDPNAPPVG RMPLPNLKDA DKLEKIKALR EASKRVVLGP
DTLPSICFYT MLNTTYTITA AEIAEDSSLL ATGFSDSGIK VWSLLPQKLR MMKTGEQLQD
ITREAEDVLV RMMDERTSET VRHLYGHSGP IYSLSFSPDR NLLLSSSEDT TIRLWSLHTW
TCVVCYKGHL FPVWCVRFSP HGYYFASASN DKTARLWATD SHQPLRIFAG HYSDVDVIQF
HPNSNYVASG SSDMTVRLWD CVTGSQVRLM TGHKEPIFSL VFSIEGRFLA SAGADHRVLM
WDLAHGHLVA ALSGHTANIH CLSFSRDGNI LVSGSLDYTL KLWDFTKLAE EMSLEDVNVS
HNPDVKTNSE SYLLRTFPTK NTSVLALHFS QFKFLYKEIE SLRCIIKVIN KFFTIIIPTV
NKYNTFNFPW RAADSYEMVK ALYDFKATFA KTLSFREGEF FILLQRNVKQ KNWWQVVNRG
GRLGYIPSNY ITSVKAQPQF LIDFLEDCIL TLETEIKKDG DSVQPDKQDL LAKLVERKKQ
VELIKKSKRQ APKPPELDCG IVPKETHSVT ACDNTEADVR SAPSNASYAT AQTTLRGNNT
DHVETNAQCQ RPNGDEQRVQ SLPRQSSSDI VQKIQLPPIT EVRKSSSQGS IQNVSSSSSI
KSNSPAKTSS PTKSNSLQAI NSRSAYQLLD QVRKNTQLSH EMSKVAVTVV VSSLRQLLPE
TVSHYLDALL HQLQTPLTVS KMSIEETYDA NRLKIIFTEL TSCKEDSQQR SWMLYEDESI
IVEYIKELTE ILTNADVNVS RYVLRQDRYN GVTILVQYYQ METRWTIRQL LLQSFGVMCS
LDPVVLTIML NSILPMELAR DMKSNPRNVL RLNYSSLLLT MIFSMGEPMP VTHLEQLGTD
FISFLLDLIE TPPDTDLEDQ IPDLFINLIL SYNLQFTTSE NIVLNALRER TPPHSVLKLF
VDLFSNDAIA SLFYTNDVKV LIDIILRQLF DMFPGDKVLH YAVTKKTHIG PIKNVLDVYL
IYIFNMQKQR RQYLELCRRV LRTSNYNEHR HRSGDLLKCF TRIFCEETAE SHEDQQVVRE
ISNEFPHLFR ISKSSSPIIQ DNYSPVIISI NSEKEKKHIF AANVPFVYTL LYFKLIRNLD
TINFLLSQTH NNVTKPYFV
//
