ID A0A4U0TJQ4_9PEZI Unreviewed; 1202 AA.
AC A0A4U0TJQ4;
DT 31-JUL-2019, integrated into UniProtKB/TrEMBL.
DT 31-JUL-2019, sequence version 1.
DT 27-MAR-2024, entry version 16.
DE RecName: Full=Rad4-domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=B0A50_08440 {ECO:0000313|EMBL:TKA22060.1};
OS Salinomyces thailandica.
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes;
OC Dothideomycetidae; Mycosphaerellales; Teratosphaeriaceae; Salinomyces.
OX NCBI_TaxID=706561 {ECO:0000313|EMBL:TKA22060.1, ECO:0000313|Proteomes:UP000308549};
RN [1] {ECO:0000313|EMBL:TKA22060.1, ECO:0000313|Proteomes:UP000308549}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCFEE 6315 {ECO:0000313|EMBL:TKA22060.1,
RC ECO:0000313|Proteomes:UP000308549};
RA Coleine C., Masonjones S., Stajich J.E.;
RT "Genomes of endolithic fungi from Antarctica.";
RL Submitted (MAR-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the XPC family. {ECO:0000256|ARBA:ARBA00009525}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:TKA22060.1}.
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DR EMBL; NAJL01000086; TKA22060.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A4U0TJQ4; -.
DR Proteomes; UP000308549; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003684; F:damaged DNA binding; IEA:InterPro.
DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro.
DR Gene3D; 2.20.20.110; Rad4, beta-hairpin domain BHD1; 1.
DR Gene3D; 3.30.60.290; Rad4, beta-hairpin domain BHD2; 1.
DR Gene3D; 3.30.70.2460; Rad4, beta-hairpin domain BHD3; 1.
DR Gene3D; 3.90.260.10; Transglutaminase-like; 1.
DR InterPro; IPR018327; BHD_2.
DR InterPro; IPR004583; DNA_repair_Rad4.
DR InterPro; IPR038765; Papain-like_cys_pep_sf.
DR InterPro; IPR018325; Rad4/PNGase_transGLS-fold.
DR InterPro; IPR018326; Rad4_beta-hairpin_dom1.
DR InterPro; IPR018328; Rad4_beta-hairpin_dom3.
DR InterPro; IPR042488; Rad4_BHD3_sf.
DR InterPro; IPR036985; Transglutaminase-like_sf.
DR PANTHER; PTHR12135:SF0; DNA REPAIR PROTEIN COMPLEMENTING XP-C CELLS; 1.
DR PANTHER; PTHR12135; DNA REPAIR PROTEIN XP-C / RAD4; 1.
DR Pfam; PF10403; BHD_1; 1.
DR Pfam; PF10404; BHD_2; 1.
DR Pfam; PF10405; BHD_3; 1.
DR Pfam; PF03835; Rad4; 1.
DR SMART; SM01030; BHD_1; 1.
DR SMART; SM01031; BHD_2; 1.
DR SMART; SM01032; BHD_3; 1.
DR SUPFAM; SSF54001; Cysteine proteinases; 1.
PE 3: Inferred from homology;
KW DNA damage {ECO:0000256|ARBA:ARBA00022763};
KW DNA repair {ECO:0000256|ARBA:ARBA00023204};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000308549}.
FT DOMAIN 644..701
FT /note="Rad4 beta-hairpin"
FT /evidence="ECO:0000259|SMART:SM01030"
FT DOMAIN 703..766
FT /note="Rad4 beta-hairpin"
FT /evidence="ECO:0000259|SMART:SM01031"
FT DOMAIN 773..847
FT /note="Rad4 beta-hairpin"
FT /evidence="ECO:0000259|SMART:SM01032"
FT REGION 1..167
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 231..260
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 383..462
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 620..645
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 905..1202
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 45..66
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 67..83
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 84..101
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 102..119
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 386..448
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 905..921
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 940..975
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 995..1009
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1011..1025
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1076..1097
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1103..1119
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1127..1151
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1168..1185
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1202 AA; 133758 MW; 2E88DC6F386B9883 CRC64;
MPPFISRKRQ RSPSPAATPP SGKVKAAPKA VPTQKRNKTS VFEAVDAPAD RKRDAVANRK
LLDELNDNND DDDESLSEAD SDEFEDVPAP KRRKTLPQAE PDGEGEEEDD DDEEMDWEDA
ITQTAPSSTA KPEPEIGDIS FTVKEDGSYT APDAGVSVPG LGKKGPSKRE KQVRTQTHCL
HVQTLLWHNT VRNSWVNDRE AQKTLVEGLP EGVKREVTRW REAMGTLSKE ELEAKKKAAA
ARQKGRKGKK GKKGGGRDWN FDAEHLEQGV PNLSAGDPLL RLLKVLAAYW RKRFAITAPG
LRKQGYMTIR RLGEEIKDWD KNKGDAQEHS ERIEDIAGFR RLAKKCEGSR DVGAQLFCGL
LRGLGLDTRM VANLQPAGLG WSKAEEANAK KPKKDRKDEK DEQESQKQEQ KVKTEVNGSG
KKFRQELKPE KPSRKSNRGN KAEPISLDDD SDSPLSSAPS DAEAEMIEID DDDDESVVDV
TPAIPKRKPN KNYDRDLAFP NYWVEVCSPA SHKYIPVDPI VLSTIASNDE LLQTFEPRGK
KAEVGKQVMA YTIAFSSDGT AKDVTVRYLK KHQLPGKTKG TRMAVEKVPI YNRKGKVRRY
EEYDWFRTVM SLYDRPENKR TAADELEETT DLKPQKPAKE DGKEVEKESL QWYKQSADFV
LEQHLRREEA IKPGAKAVKT FTQGKGDKVK DHPVFKRSDV LACKTVESWH KEGRALKAGE
HPMKLVPMRA VTLIRKREME DAQRETGEKL KQGLYSVGQT DWIIPPPIED GVIPKNAYGN
MDVYVPTMVP EGAKHLPLKG SAKLCRKLGI DYAEACTGFE FGKQRAVPVL TGVVVAEEHV
EMVRDAWRVE QAEVKRKEDV KRTAAALSSW RKMLLGLRVL ERMHTEYAGS AGKEEEYNPF
LARAKREERE DGGERAVDVG AEGDEFGGGG FFPEGYDEEE VPQQTGRRKA AEDDNTGEDG
GFLVEEDHDN EVEAGGFLVE EMPQDAARAS KGYAPTTPVS LQSMHNAADN ANGEEVEDVK
TEDTAAEEQL VSTALALHPR KRPTRAPRKQ PTKATAKPAA RPQARSEKTD VEDSSLSELE
EASEQDKEDD STEGPSDPDD TDTATPPPTT KSKATRKPAS PKVQVTPRGK PTASTTRATR
SAGTRNGNAK TAVRSKYFVA SDSEDEAESK KGEEEEKEEE EEESEAEVVK PRRTTRRTSA
RV
//
