ID A0A4U0W5I2_9PEZI Unreviewed; 1014 AA.
AC A0A4U0W5I2;
DT 31-JUL-2019, integrated into UniProtKB/TrEMBL.
DT 31-JUL-2019, sequence version 1.
DT 27-MAR-2024, entry version 18.
DE RecName: Full=Sm protein F {ECO:0000256|ARBA:ARBA00030144};
DE Flags: Fragment;
GN ORFNames=B0A49_13156 {ECO:0000313|EMBL:TKA57303.1};
OS Cryomyces minteri.
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes;
OC Dothideomycetes incertae sedis; Cryomyces.
OX NCBI_TaxID=331657 {ECO:0000313|EMBL:TKA57303.1, ECO:0000313|Proteomes:UP000308768};
RN [1] {ECO:0000313|EMBL:TKA57303.1, ECO:0000313|Proteomes:UP000308768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCFEE 5187 {ECO:0000313|EMBL:TKA57303.1,
RC ECO:0000313|Proteomes:UP000308768};
RA Coleine C., Masonjones S., Stajich J.E.;
RT "Genomes of endolithic fungi from Antarctica.";
RL Submitted (MAR-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
CC -!- SIMILARITY: Belongs to the TMEM19 family.
CC {ECO:0000256|ARBA:ARBA00009012}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:TKA57303.1}.
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DR EMBL; NAJN01002126; TKA57303.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A4U0W5I2; -.
DR STRING; 331657.A0A4U0W5I2; -.
DR Proteomes; UP000308768; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0005681; C:spliceosomal complex; IEA:InterPro.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0000387; P:spliceosomal snRNP assembly; IEA:InterPro.
DR CDD; cd01722; Sm_F; 1.
DR Gene3D; 2.30.30.100; -; 1.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR InterPro; IPR002794; DUF92_TMEM19.
DR InterPro; IPR010920; LSM_dom_sf.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR047575; Sm.
DR InterPro; IPR001163; Sm_dom_euk/arc.
DR InterPro; IPR034100; Sm_F.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 2.
DR PANTHER; PTHR47933; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIAL; 1.
DR PANTHER; PTHR47933:SF2; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 2; 1.
DR Pfam; PF01940; DUF92; 1.
DR Pfam; PF01423; LSM; 1.
DR Pfam; PF13041; PPR_2; 1.
DR SMART; SM00651; Sm; 1.
DR SUPFAM; SSF50182; Sm-like ribonucleoproteins; 1.
DR PROSITE; PS51375; PPR; 2.
DR PROSITE; PS52002; SM; 1.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|ARBA:ARBA00023136};
KW Reference proteome {ECO:0000313|Proteomes:UP000308768};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989}.
FT REPEAT 478..512
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 513..543
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 926..999
FT /note="Sm"
FT /evidence="ECO:0000259|PROSITE:PS52002"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:TKA57303.1"
SQ SEQUENCE 1014 AA; 110929 MW; D67A9AB8AE5AC785 CRC64;
DTVGLKAFLA VWLKNRAFSK AMDFAAEKLS AGARTVAMAA ICITAADSNN SDVATKAFES
LIASRTDMPQ PAIALLAMHV RAGDIDAAQS FWIMLESFPA TPQFIEPTTM HSIALVGSGH
SERAMRQSRN MFARIRDSQQ ETNQAKTELV EQIDEAIETM GRFLLKRGIV LSPIASTELM
WTMIENGGLV TPVAEHLLAG LGPDSIAQLP ASDVDLLMQV QAGMILNDST SNTAGAARFA
YMLGVIVSRS LVPDSRTEDL IDKTLINLNR GDLTRLWHSY RYPVAEPLFS PVQYPSYLPA
FLPATPAFDD SFDPYASSTD NKGSIVITDL LEKAHGRYSS HLNEALTKFR NIRRTGRHPR
FFTYAKLIMA AAKEDRLDVA REILAMAQQD VPLQAQYRVV RYGWVTILDA MVAACVTTGQ
RTTAAQYHQE LLDMGAAPSA NTFGLYITTL KESTKTFDEA TEAVKIFLRA RSEGVEPSSF
LYNALIGKLG KARRIDDCLF YFGEMRNLGI RPTSVTYGTI VNALCRVSDE KFAEELFEEM
ESMPNYKPRP APYHSLMQFF LTTKRDRSKV LAFYERMRAK NIQPTMHTYK LLIDTHATLE
PVDMNAAEAV LDQMRASGEQ PEAVHYASLI HAKGCVQHDI DGARRLFDNV VRETRGRPQP
CLYQALFEAM VANHDVAATE EIIGDMRARR VEMTPYIANS LIHGWAMAKN IEKAKAMFDA
VEPAKREPST YEAMVRAFMT VEDRDSAMKV VNEALSRSYP AAVANKILEL VGDTFSSELG
ILSSSPPRLL TSPTLRRVPP GTNGGVTATG LAAGLLGSFL IAATSVLLLP FCGPSPRLAR
LSFAGTASGY DNAGWDLQSK LSFVLGITAL GFCGSVLDSL LGGLLQASVT DTRTGKIIEG
DGGKKVLVSG AGSMHQKQVA KFVPLNPRPM LQSLVDEDVL IRLKWGNTEY KGRLVSVDSY
MNIQLASTLE FIDGKETGAL GQVLIRCVRN TSGFLSAAAA AAAAAVRTRL KAEV
//