ID   A0A4U0W5I2_9PEZI        Unreviewed;      1014 AA.
AC   A0A4U0W5I2;
DT   31-JUL-2019, integrated into UniProtKB/TrEMBL.
DT   31-JUL-2019, sequence version 1.
DT   27-MAR-2024, entry version 18.
DE   RecName: Full=Sm protein F {ECO:0000256|ARBA:ARBA00030144};
DE   Flags: Fragment;
GN   ORFNames=B0A49_13156 {ECO:0000313|EMBL:TKA57303.1};
OS   Cryomyces minteri.
OC   Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes;
OC   Dothideomycetes incertae sedis; Cryomyces.
OX   NCBI_TaxID=331657 {ECO:0000313|EMBL:TKA57303.1, ECO:0000313|Proteomes:UP000308768};
RN   [1] {ECO:0000313|EMBL:TKA57303.1, ECO:0000313|Proteomes:UP000308768}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CCFEE 5187 {ECO:0000313|EMBL:TKA57303.1,
RC   ECO:0000313|Proteomes:UP000308768};
RA   Coleine C., Masonjones S., Stajich J.E.;
RT   "Genomes of endolithic fungi from Antarctica.";
RL   Submitted (MAR-2017) to the EMBL/GenBank/DDBJ databases.
CC   -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC       pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
CC   -!- SIMILARITY: Belongs to the TMEM19 family.
CC       {ECO:0000256|ARBA:ARBA00009012}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:TKA57303.1}.
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DR   EMBL; NAJN01002126; TKA57303.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A4U0W5I2; -.
DR   STRING; 331657.A0A4U0W5I2; -.
DR   Proteomes; UP000308768; Unassembled WGS sequence.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0005681; C:spliceosomal complex; IEA:InterPro.
DR   GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR   GO; GO:0000387; P:spliceosomal snRNP assembly; IEA:InterPro.
DR   CDD; cd01722; Sm_F; 1.
DR   Gene3D; 2.30.30.100; -; 1.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR   InterPro; IPR002794; DUF92_TMEM19.
DR   InterPro; IPR010920; LSM_dom_sf.
DR   InterPro; IPR002885; Pentatricopeptide_rpt.
DR   InterPro; IPR047575; Sm.
DR   InterPro; IPR001163; Sm_dom_euk/arc.
DR   InterPro; IPR034100; Sm_F.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   NCBIfam; TIGR00756; PPR; 2.
DR   PANTHER; PTHR47933; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIAL; 1.
DR   PANTHER; PTHR47933:SF2; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 2; 1.
DR   Pfam; PF01940; DUF92; 1.
DR   Pfam; PF01423; LSM; 1.
DR   Pfam; PF13041; PPR_2; 1.
DR   SMART; SM00651; Sm; 1.
DR   SUPFAM; SSF50182; Sm-like ribonucleoproteins; 1.
DR   PROSITE; PS51375; PPR; 2.
DR   PROSITE; PS52002; SM; 1.
PE   3: Inferred from homology;
KW   Membrane {ECO:0000256|ARBA:ARBA00023136};
KW   Reference proteome {ECO:0000313|Proteomes:UP000308768};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737};
KW   Transmembrane {ECO:0000256|ARBA:ARBA00022692};
KW   Transmembrane helix {ECO:0000256|ARBA:ARBA00022989}.
FT   REPEAT          478..512
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          513..543
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   DOMAIN          926..999
FT                   /note="Sm"
FT                   /evidence="ECO:0000259|PROSITE:PS52002"
FT   NON_TER         1
FT                   /evidence="ECO:0000313|EMBL:TKA57303.1"
SQ   SEQUENCE   1014 AA;  110929 MW;  D67A9AB8AE5AC785 CRC64;
     DTVGLKAFLA VWLKNRAFSK AMDFAAEKLS AGARTVAMAA ICITAADSNN SDVATKAFES
     LIASRTDMPQ PAIALLAMHV RAGDIDAAQS FWIMLESFPA TPQFIEPTTM HSIALVGSGH
     SERAMRQSRN MFARIRDSQQ ETNQAKTELV EQIDEAIETM GRFLLKRGIV LSPIASTELM
     WTMIENGGLV TPVAEHLLAG LGPDSIAQLP ASDVDLLMQV QAGMILNDST SNTAGAARFA
     YMLGVIVSRS LVPDSRTEDL IDKTLINLNR GDLTRLWHSY RYPVAEPLFS PVQYPSYLPA
     FLPATPAFDD SFDPYASSTD NKGSIVITDL LEKAHGRYSS HLNEALTKFR NIRRTGRHPR
     FFTYAKLIMA AAKEDRLDVA REILAMAQQD VPLQAQYRVV RYGWVTILDA MVAACVTTGQ
     RTTAAQYHQE LLDMGAAPSA NTFGLYITTL KESTKTFDEA TEAVKIFLRA RSEGVEPSSF
     LYNALIGKLG KARRIDDCLF YFGEMRNLGI RPTSVTYGTI VNALCRVSDE KFAEELFEEM
     ESMPNYKPRP APYHSLMQFF LTTKRDRSKV LAFYERMRAK NIQPTMHTYK LLIDTHATLE
     PVDMNAAEAV LDQMRASGEQ PEAVHYASLI HAKGCVQHDI DGARRLFDNV VRETRGRPQP
     CLYQALFEAM VANHDVAATE EIIGDMRARR VEMTPYIANS LIHGWAMAKN IEKAKAMFDA
     VEPAKREPST YEAMVRAFMT VEDRDSAMKV VNEALSRSYP AAVANKILEL VGDTFSSELG
     ILSSSPPRLL TSPTLRRVPP GTNGGVTATG LAAGLLGSFL IAATSVLLLP FCGPSPRLAR
     LSFAGTASGY DNAGWDLQSK LSFVLGITAL GFCGSVLDSL LGGLLQASVT DTRTGKIIEG
     DGGKKVLVSG AGSMHQKQVA KFVPLNPRPM LQSLVDEDVL IRLKWGNTEY KGRLVSVDSY
     MNIQLASTLE FIDGKETGAL GQVLIRCVRN TSGFLSAAAA AAAAAVRTRL KAEV
//