ID A0A4U5U7L2_COLLU Unreviewed; 1372 AA.
AC A0A4U5U7L2;
DT 31-JUL-2019, integrated into UniProtKB/TrEMBL.
DT 31-JUL-2019, sequence version 1.
DT 27-MAR-2024, entry version 13.
DE SubName: Full=LIM domain only protein 7 {ECO:0000313|EMBL:TKS70273.1};
GN ORFNames=D9C73_004341 {ECO:0000313|EMBL:TKS70273.1};
OS Collichthys lucidus (Big head croaker) (Sciaena lucida).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC Eupercaria; Sciaenidae; Collichthys.
OX NCBI_TaxID=240159 {ECO:0000313|EMBL:TKS70273.1, ECO:0000313|Proteomes:UP000298787};
RN [1] {ECO:0000313|EMBL:TKS70273.1, ECO:0000313|Proteomes:UP000298787}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JT15FE1705JMU {ECO:0000313|EMBL:TKS70273.1};
RC TISSUE=Muscle {ECO:0000313|EMBL:TKS70273.1};
RA Cai M., Xiao S.;
RT "Genome Assembly of Collichthys lucidus.";
RL Submitted (JAN-2019) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM014081; TKS70273.1; -; Genomic_DNA.
DR STRING; 240159.A0A4U5U7L2; -.
DR Proteomes; UP000298787; Chromosome 4.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0030155; P:regulation of cell adhesion; IEA:InterPro.
DR GO; GO:0023051; P:regulation of signaling; IEA:InterPro.
DR CDD; cd08368; LIM; 1.
DR CDD; cd00992; PDZ_signaling; 1.
DR Gene3D; 2.30.42.10; -; 1.
DR Gene3D; 1.10.418.10; Calponin-like domain; 1.
DR Gene3D; 2.10.110.10; Cysteine Rich Protein; 1.
DR InterPro; IPR001715; CH_dom.
DR InterPro; IPR036872; CH_dom_sf.
DR InterPro; IPR031865; DUF4757.
DR InterPro; IPR029978; LMO-7.
DR InterPro; IPR001478; PDZ.
DR InterPro; IPR036034; PDZ_sf.
DR InterPro; IPR001781; Znf_LIM.
DR PANTHER; PTHR46767; LIM DOMAIN ONLY PROTEIN 7; 1.
DR PANTHER; PTHR46767:SF2; LIM DOMAIN ONLY PROTEIN 7; 1.
DR Pfam; PF00307; CH; 1.
DR Pfam; PF15949; DUF4757; 1.
DR Pfam; PF00412; LIM; 1.
DR Pfam; PF00595; PDZ; 1.
DR SMART; SM00033; CH; 1.
DR SMART; SM00132; LIM; 1.
DR SMART; SM00228; PDZ; 1.
DR SUPFAM; SSF47576; Calponin-homology domain, CH-domain; 1.
DR SUPFAM; SSF50156; PDZ domain-like; 1.
DR PROSITE; PS50021; CH; 1.
DR PROSITE; PS50023; LIM_DOMAIN_2; 1.
DR PROSITE; PS50106; PDZ; 1.
PE 4: Predicted;
KW LIM domain {ECO:0000256|ARBA:ARBA00023038, ECO:0000256|PROSITE-
KW ProRule:PRU00125}; Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00125};
KW Reference proteome {ECO:0000313|Proteomes:UP000298787};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00125}.
FT DOMAIN 12..129
FT /note="Calponin-homology (CH)"
FT /evidence="ECO:0000259|PROSITE:PS50021"
FT DOMAIN 875..934
FT /note="PDZ"
FT /evidence="ECO:0000259|PROSITE:PS50106"
FT DOMAIN 1301..1367
FT /note="LIM zinc-binding"
FT /evidence="ECO:0000259|PROSITE:PS50023"
FT REGION 440..517
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 532..559
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 677..700
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 717..754
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 768..857
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1012..1035
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1073..1144
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1162..1191
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 440..463
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 540..555
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 728..754
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 778..796
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 819..857
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1012..1030
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1110..1126
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1174..1191
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1372 AA; 153255 MW; C42006F1E60132AA CRC64;
MEWRQQTSVS CADAFTEAQR WIEEVTGKSF GCNDFRAALE NGVLLCDLIN QLKPGIIKRV
NRLSTPIAGL DNVNVFLKAC GKLGLNVSQL FHPGDLQDLS TRATLRRDES KRRLKNVLIT
IYWLGRKAHI DAFYSGPQLN FKAFEGLLGL ALSKALDEGS NVYTKDGGYR ECWDSEREEC
LRMRPSYKIE SSMDRVDTLD SRAIHPNSEG CGSDAEAEQV FKMETAQTTT QQSKGHIPQP
LLRRKQGLEQ NFASPLSSIE DTPFSPQPHL TVSPSECAFD EELFLQALCE EESEDDYPEA
DPVLDDLYLR RVQQSLHQTS TNPSHDRFLP RYWTPEEEVR VRTIYLGSQR RPWYRKMQGL
RAYQIQVRPE RQTVQVNPGW IWSKSLSDIP MVYPVRKVPE GNIIYDVGQE ADMALEWNQE
NKRKCSVAAK DSEAQWQDDL TKWKNRRRST KSDLRRKSQD RDHVINQMTN GSLANFGKNE
AGGPLKRDQQ SPRRHNPAPR PYSTSPPSKA SSSDLRPHTR ALLARSYATE APYSPTAPLS
PHKSGHTQGS SVGAMPASDG NLLGEEAHFA SLALSGTGVT TPSPDFPFSS HTQVKAQGMP
APFQSTSELA RPENVFTNQI STLTTTIQPN ETTKSTSTRD PTATMSSCKE LPYCADPKGP
TSCPGAVHQA GVDALDDHKP REENQKTSWE PAVEPGRDQQ TSGVYKYLYR AGSWSGSASL
PRGYRRSEGS SRLSSAITAR PFGSKQSRVS SLPRLCNVDN NQGLLLKSEK EESLSQPIES
SLKRQTASTH LTGQHQPLIT HRKGFQAKQH GAEQREEVKG VTLSSQTNGY HHQPYSQTQL
QPYSNPQAHH NNSSTFSTNA SIDHTKVDHS DMRVSLTLKP NSRPDFGFQT HWDSTGARVK
SIQPGSPAEL CQLCVDDEIV AVNGVAVAHM NYTQWKDKMT SSLQTGGLTM DIRRYGNKDW
STSEGTHHNQ PGQSRMTLNL TSAAPVLIGC PNHHANGGAS TETAVRKVSS FNGQTDNLQV
PSLSPSSSSW SWDREEDRRR QEKWQEEQER LLQEKYQRDQ ERLEAEWRKA QQDAMGECRK
SENTFEMTNG GERPASTPLH VNGLANKTTE EKQNPDRYEL KESEPGSKPQ SKAQGVQNDK
TAERAWAEDS CGFAQLSPAH RAKSLSTPAL AGHHKQIRGD ERKRKGQSLS KIEKERQQIL
EEMKKRTQLL TDNSWIRQRS SSFYKEPIYV GAPLKRFDSL DNLDTSLTTA PFNYPRPHSA
AAGYCAPSRN ASSRYSTGAI VSQRNASMDP SNHGRMVSGR RMCCVCERAL GSGAAMVIEA
LSLCLHLACF QCVGCHRHLG GTETGVQVRI RNRKPYCEPC YFQLKSFGAP SM
//
