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Database: UniProt
Entry: A0A4V6ASJ4_COLLU
LinkDB: A0A4V6ASJ4_COLLU
Original site: A0A4V6ASJ4_COLLU 
ID   A0A4V6ASJ4_COLLU        Unreviewed;       285 AA.
AC   A0A4V6ASJ4;
DT   31-JUL-2019, integrated into UniProtKB/TrEMBL.
DT   31-JUL-2019, sequence version 1.
DT   24-JAN-2024, entry version 13.
DE   SubName: Full=Homeobox protein {ECO:0000313|EMBL:TKS88562.1};
GN   ORFNames=D9C73_023008 {ECO:0000313|EMBL:TKS88562.1};
OS   Collichthys lucidus (Big head croaker) (Sciaena lucida).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC   Eupercaria; Sciaenidae; Collichthys.
OX   NCBI_TaxID=240159 {ECO:0000313|EMBL:TKS88562.1, ECO:0000313|Proteomes:UP000298787};
RN   [1] {ECO:0000313|EMBL:TKS88562.1, ECO:0000313|Proteomes:UP000298787}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=JT15FE1705JMU {ECO:0000313|EMBL:TKS88562.1};
RC   TISSUE=Muscle {ECO:0000313|EMBL:TKS88562.1};
RA   Cai M., Xiao S.;
RT   "Genome Assembly of Collichthys lucidus.";
RL   Submitted (JAN-2019) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Sequence-specific transcription factor which is part of a
CC       developmental regulatory system that provides cells with specific
CC       positional identities on the anterior-posterior axis.
CC       {ECO:0000256|ARBA:ARBA00003263}.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|PROSITE-ProRule:PRU00108,
CC       ECO:0000256|RuleBase:RU000682}.
CC   -!- SIMILARITY: Belongs to the distal-less homeobox family.
CC       {ECO:0000256|ARBA:ARBA00007916}.
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DR   EMBL; CM014097; TKS88562.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A4V6ASJ4; -.
DR   STRING; 240159.A0A4V6ASJ4; -.
DR   Proteomes; UP000298787; Chromosome 20.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IEA:InterPro.
DR   CDD; cd00086; homeodomain; 1.
DR   Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR   InterPro; IPR022135; Distal-less_N.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR017970; Homeobox_CS.
DR   InterPro; IPR001356; Homeobox_dom.
DR   InterPro; IPR020479; Homeobox_metazoa.
DR   InterPro; IPR000047; HTH_motif.
DR   PANTHER; PTHR24327; HOMEOBOX PROTEIN; 1.
DR   PANTHER; PTHR24327:SF31; HOMEOBOX PROTEIN DLX-5; 1.
DR   Pfam; PF12413; DLL_N; 1.
DR   Pfam; PF00046; Homeodomain; 1.
DR   PRINTS; PR00024; HOMEOBOX.
DR   PRINTS; PR00031; HTHREPRESSR.
DR   SMART; SM00389; HOX; 1.
DR   SUPFAM; SSF46689; Homeodomain-like; 1.
DR   PROSITE; PS00027; HOMEOBOX_1; 1.
DR   PROSITE; PS50071; HOMEOBOX_2; 1.
PE   3: Inferred from homology;
KW   Developmental protein {ECO:0000256|ARBA:ARBA00022473};
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|PROSITE-
KW   ProRule:PRU00108};
KW   Homeobox {ECO:0000256|ARBA:ARBA00023155, ECO:0000256|PROSITE-
KW   ProRule:PRU00108};
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PROSITE-
KW   ProRule:PRU00108}; Reference proteome {ECO:0000313|Proteomes:UP000298787};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT   DOMAIN          136..196
FT                   /note="Homeobox"
FT                   /evidence="ECO:0000259|PROSITE:PS50071"
FT   DNA_BIND        138..197
FT                   /note="Homeobox"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00108"
FT   REGION          20..47
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          199..240
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        204..240
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   285 AA;  31336 MW;  59587066991CD424 CRC64;
     MTGVFDRRIP SVKPADFQSS FQLSTMHHPS QESPTLPEST ATDSGYYSPA AGVTHGYCSP
     SSTSYGKPLN AYQYQYPGVN GSAGNYSTKS YTDYSSYTTP AYHQYAGTYS RVQAQPSPQE
     KEISEPEVRM VNGKPKKVRK PRTIYSSFQL AALQRRFQNT QYLALPERAE LAASLGLTQT
     QVKIWFQNRR SKLKKIMKNG ELPPEHSPSS SDPMACNSPQ SPAVWDTQGP SRPHSLQPQN
     INTTASNFLE TSGSWYTSAG SSMASHLQTP NSIQHSLALG AGTLY
//
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