ID A0A4W5RDT2_9TELE Unreviewed; 621 AA.
AC A0A4W5RDT2;
DT 18-SEP-2019, integrated into UniProtKB/TrEMBL.
DT 18-SEP-2019, sequence version 1.
DT 27-MAR-2024, entry version 19.
DE SubName: Full=Upstream binding transcription factor, like {ECO:0000313|Ensembl:ENSHHUP00000086832.1};
OS Hucho hucho (huchen).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes;
OC Salmonidae; Salmoninae; Hucho.
OX NCBI_TaxID=62062 {ECO:0000313|Ensembl:ENSHHUP00000086832.1, ECO:0000313|Proteomes:UP000314982};
RN [1] {ECO:0000313|Proteomes:UP000314982}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA Macqueen D.J., Gundappa M.K.;
RT "Genome assembly of Danube salmon.";
RL Submitted (JUN-2018) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSHHUP00000086832.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (SEP-2023) to UniProtKB.
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DR AlphaFoldDB; A0A4W5RDT2; -.
DR Ensembl; ENSHHUT00000089543.1; ENSHHUP00000086832.1; ENSHHUG00000050196.1.
DR GeneTree; ENSGT00940000165754; -.
DR Proteomes; UP000314982; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-UniRule.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR CDD; cd21998; HMG-box_UBF1_rpt1-like; 1.
DR CDD; cd21999; HMG-box_UBF1_rpt2; 1.
DR CDD; cd22000; HMG-box_UBF1_rpt3; 1.
DR CDD; cd22002; HMG-box_UBF1_rpt5; 1.
DR CDD; cd22003; HMG-box_UBF1_rpt6-like; 1.
DR Gene3D; 1.10.30.10; High mobility group box domain; 5.
DR InterPro; IPR029215; HMG_box_5.
DR InterPro; IPR009071; HMG_box_dom.
DR InterPro; IPR036910; HMG_box_dom_sf.
DR PANTHER; PTHR46318; UPSTREAM BINDING TRANSCRIPTION FACTOR; 1.
DR PANTHER; PTHR46318:SF5; UPSTREAM-BINDING TRANSCRIPTION FACTOR,-LIKE; 1.
DR Pfam; PF00505; HMG_box; 3.
DR Pfam; PF14887; HMG_box_5; 1.
DR SMART; SM00398; HMG; 5.
DR SUPFAM; SSF47095; HMG-box; 5.
DR PROSITE; PS50118; HMG_BOX_2; 5.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|PROSITE-
KW ProRule:PRU00267};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PROSITE-
KW ProRule:PRU00267}; Reference proteome {ECO:0000313|Proteomes:UP000314982};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 91..159
FT /note="HMG box"
FT /evidence="ECO:0000259|PROSITE:PS50118"
FT DOMAIN 175..243
FT /note="HMG box"
FT /evidence="ECO:0000259|PROSITE:PS50118"
FT DOMAIN 273..337
FT /note="HMG box"
FT /evidence="ECO:0000259|PROSITE:PS50118"
FT DOMAIN 415..482
FT /note="HMG box"
FT /evidence="ECO:0000259|PROSITE:PS50118"
FT DOMAIN 506..572
FT /note="HMG box"
FT /evidence="ECO:0000259|PROSITE:PS50118"
FT DNA_BIND 91..159
FT /note="HMG box"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00267"
FT DNA_BIND 175..243
FT /note="HMG box"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00267"
FT DNA_BIND 273..337
FT /note="HMG box"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00267"
FT DNA_BIND 415..482
FT /note="HMG box"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00267"
FT DNA_BIND 506..572
FT /note="HMG box"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00267"
FT REGION 485..510
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 141..168
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 621 AA; 72915 MW; 6817AF71D7F10126 CRC64;
MNGSSSMPSA SQTIQIKTEP VVDAWSKEDC LTLLERIQSL LPDGDAMKYK TTESHFDWEK
VSTECHRNFD VIEFVKNPYK GKKLKTHPDF PKKPLTPYFR FFMEKRAKYA KIHPEMSNLD
LTKILSKKYK ELPDKKKQKY ITEFQREKES FEKNMARFKE DHPELIEERK KSDLPEKPKT
PQQLWYNHEK KTYMKLHPDV SQKELKEALR RQWSQLSDKK RLKWISKALE LQKDYAGSMK
VYQEAHPDAE EHVKSVLTKA ERQLKDKFDG RPTKPPPNGY SLYCAELMVN MKDVPSTERM
VLCSKQWKMM TQKEKDMFQK RCEQKKKQYE IDLQRFLESL PEEERDRVMT EEKLGGSRLG
MGAAGSPHGA KSPSAKVGLT KLQQERCREA ELDHWVHAGL TAKEKRDGKK RTKIPETPKT
AEEMWQQSVI GDYLAKYRSD RKKAQSAMES AWKAMEKKEK IPWIKKAADD QKRYEVQYRP
VRELLESRTP QSGAGQRKPK FEGEPKKPPV SGYQMFSQEL LTNGELNHFS LKERMVEIGK
RWHKLSQSHK DKYKKLVEEL QIEYKAELEA WVKSLSPQER AVYKEFSTTV SCTLSNMFLT
SHSTLIQHST SYTMPQTYNL I
//
