ID A0A4W6CES6_LATCA Unreviewed; 601 AA.
AC A0A4W6CES6;
DT 18-SEP-2019, integrated into UniProtKB/TrEMBL.
DT 18-SEP-2019, sequence version 1.
DT 27-MAR-2024, entry version 19.
DE SubName: Full=Upstream binding transcription factor, like {ECO:0000313|Ensembl:ENSLCAP00010012062.1};
GN Name=ubtfl {ECO:0000313|Ensembl:ENSLCAP00010012062.1};
OS Lates calcarifer (Barramundi) (Holocentrus calcarifer).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC Carangaria; Carangaria incertae sedis; Centropomidae; Lates.
OX NCBI_TaxID=8187 {ECO:0000313|Ensembl:ENSLCAP00010012062.1, ECO:0000313|Proteomes:UP000314980};
RN [1] {ECO:0000313|Proteomes:UP000314980}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA Sai Rama Sridatta P.;
RL Submitted (SEP-2015) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSLCAP00010012062.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (SEP-2023) to UniProtKB.
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DR AlphaFoldDB; A0A4W6CES6; -.
DR Ensembl; ENSLCAT00010012321.1; ENSLCAP00010012062.1; ENSLCAG00010005693.1.
DR GeneTree; ENSGT00940000165754; -.
DR Proteomes; UP000314980; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-UniRule.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR CDD; cd21998; HMG-box_UBF1_rpt1-like; 1.
DR CDD; cd21999; HMG-box_UBF1_rpt2; 1.
DR CDD; cd22000; HMG-box_UBF1_rpt3; 1.
DR CDD; cd22002; HMG-box_UBF1_rpt5; 1.
DR CDD; cd22003; HMG-box_UBF1_rpt6-like; 1.
DR Gene3D; 1.10.30.10; High mobility group box domain; 5.
DR InterPro; IPR029215; HMG_box_5.
DR InterPro; IPR009071; HMG_box_dom.
DR InterPro; IPR036910; HMG_box_dom_sf.
DR PANTHER; PTHR46318; UPSTREAM BINDING TRANSCRIPTION FACTOR; 1.
DR PANTHER; PTHR46318:SF5; UPSTREAM-BINDING TRANSCRIPTION FACTOR,-LIKE; 1.
DR Pfam; PF00505; HMG_box; 2.
DR Pfam; PF09011; HMG_box_2; 1.
DR Pfam; PF14887; HMG_box_5; 2.
DR SMART; SM00398; HMG; 5.
DR SUPFAM; SSF47095; HMG-box; 5.
DR PROSITE; PS50118; HMG_BOX_2; 5.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|PROSITE-
KW ProRule:PRU00267};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PROSITE-
KW ProRule:PRU00267}; Reference proteome {ECO:0000313|Proteomes:UP000314980};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 103..171
FT /note="HMG box"
FT /evidence="ECO:0000259|PROSITE:PS50118"
FT DOMAIN 187..256
FT /note="HMG box"
FT /evidence="ECO:0000259|PROSITE:PS50118"
FT DOMAIN 288..352
FT /note="HMG box"
FT /evidence="ECO:0000259|PROSITE:PS50118"
FT DOMAIN 418..485
FT /note="HMG box"
FT /evidence="ECO:0000259|PROSITE:PS50118"
FT DOMAIN 503..569
FT /note="HMG box"
FT /evidence="ECO:0000259|PROSITE:PS50118"
FT DNA_BIND 103..171
FT /note="HMG box"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00267"
FT DNA_BIND 187..256
FT /note="HMG box"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00267"
FT DNA_BIND 288..352
FT /note="HMG box"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00267"
FT DNA_BIND 418..485
FT /note="HMG box"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00267"
FT DNA_BIND 503..569
FT /note="HMG box"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00267"
FT REGION 396..424
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 487..506
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 153..180
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 396..420
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 601 AA; 71416 MW; 5DAAFF4E31888F9C CRC64;
FLFDLNTSSS LTVTKEDCLT LLERIRSLLP DGDGMKYKTT ESHFDWEKVC FGSFTGDMCR
QKWQKVSTEV RKYRTMTELI VDAIEFVKNP YKGKKLKTHP DFPKKPLTPY FRFFMEKRAK
YAKIHPEMSN LDLTKILSKK YKELPDKKKQ KYITEFQREK EEFEKNMARF KEDHPELIEE
RKKSDLPEKP KTPQQLWYNH EKKTYMKLHP EVHTQKELKE ALRRQWSQLS DKRRLKWISK
ALELQKDYED SMRAYHEAHP DVNSDDHVRS VLTKAERQLK DKFDGRPTKP PPNGYSLYCA
ELMVNMKDVP STERMVLCSK QWKMMTQKEK DMFQKRCEQK KKQYDIDLQR FLEVGRHPIS
LKTFLLLLHL LFFTGVSEHT GVFPMLLQER CREAEPEPWV PAGPPKERRD GKKTAKLPET
PKTAEEMWQH SVIGDYLAKY RNDRRKAQAA MEAAWKSMEK KEKIPWIKKA AEDQKRYERE
LLEMRTPAAG QTPRKPKFDG EPKKPPVSGY QMFSQELLTN GELNHFSLKE RMVEIGKRWH
KLSQSQKDKY KKLVEEQQVE YKAELEAWVK SLSPQDRAVY KEFSSSVSCS SLYHFLTVLL
L
//
