ID A0A504YX03_FASGI Unreviewed; 906 AA.
AC A0A504YX03;
DT 18-SEP-2019, integrated into UniProtKB/TrEMBL.
DT 18-SEP-2019, sequence version 1.
DT 24-JAN-2024, entry version 12.
DE RecName: Full=Coatomer subunit gamma {ECO:0000256|PIRNR:PIRNR037093};
GN ORFNames=FGIG_02657 {ECO:0000313|EMBL:TPP66442.1};
OS Fasciola gigantica (Giant liver fluke).
OC Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Platyhelminthes; Trematoda;
OC Digenea; Plagiorchiida; Echinostomata; Echinostomatoidea; Fasciolidae;
OC Fasciola.
OX NCBI_TaxID=46835 {ECO:0000313|EMBL:TPP66442.1, ECO:0000313|Proteomes:UP000316759};
RN [1] {ECO:0000313|EMBL:TPP66442.1, ECO:0000313|Proteomes:UP000316759}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Uganda_cow_1 {ECO:0000313|EMBL:TPP66442.1};
RA Choi Y.-J.;
RT "Annotation for the trematode Fasciola gigantica.";
RL Submitted (APR-2019) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: The coatomer is a cytosolic protein complex that binds to
CC dilysine motifs and reversibly associates with Golgi non-clathrin-
CC coated vesicles, which further mediate biosynthetic protein transport
CC from the ER, via the Golgi up to the trans Golgi network. Coatomer
CC complex is required for budding from Golgi membranes, and is essential
CC for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
CC {ECO:0000256|PIRNR:PIRNR037093}.
CC -!- SUBUNIT: Oligomeric complex. {ECO:0000256|PIRNR:PIRNR037093}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|PIRNR:PIRNR037093}. Golgi
CC apparatus membrane {ECO:0000256|ARBA:ARBA00004255,
CC ECO:0000256|PIRNR:PIRNR037093}; Peripheral membrane protein
CC {ECO:0000256|ARBA:ARBA00004255, ECO:0000256|PIRNR:PIRNR037093};
CC Cytoplasmic side {ECO:0000256|ARBA:ARBA00004255,
CC ECO:0000256|PIRNR:PIRNR037093}. Cytoplasmic vesicle, COPI-coated
CC vesicle membrane {ECO:0000256|PIRNR:PIRNR037093}; Peripheral membrane
CC protein {ECO:0000256|PIRNR:PIRNR037093}; Cytoplasmic side
CC {ECO:0000256|PIRNR:PIRNR037093}. Membrane
CC {ECO:0000256|ARBA:ARBA00004287}; Peripheral membrane protein
CC {ECO:0000256|ARBA:ARBA00004287}; Cytoplasmic side
CC {ECO:0000256|ARBA:ARBA00004287}.
CC -!- SIMILARITY: Belongs to the COPG family. {ECO:0000256|ARBA:ARBA00010720,
CC ECO:0000256|PIRNR:PIRNR037093}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:TPP66442.1}.
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DR EMBL; SUNJ01001821; TPP66442.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A504YX03; -.
DR STRING; 46835.A0A504YX03; -.
DR Proteomes; UP000316759; Unassembled WGS sequence.
DR GO; GO:0030126; C:COPI vesicle coat; IEA:InterPro.
DR GO; GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR GO; GO:0006886; P:intracellular protein transport; IEA:InterPro.
DR GO; GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
DR Gene3D; 2.60.40.1480; Coatomer, gamma subunit, appendage domain; 1.
DR Gene3D; 1.25.10.10; Leucine-rich Repeat Variant; 2.
DR Gene3D; 3.30.310.10; TATA-Binding Protein; 1.
DR InterPro; IPR011989; ARM-like.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR002553; Clathrin/coatomer_adapt-like_N.
DR InterPro; IPR013041; Clathrin_app_Ig-like_sf.
DR InterPro; IPR009028; Coatomer/calthrin_app_sub_C.
DR InterPro; IPR032154; Coatomer_g_Cpla.
DR InterPro; IPR017106; Coatomer_gsu.
DR InterPro; IPR013040; Coatomer_gsu_app_Ig-like_dom.
DR InterPro; IPR037067; Coatomer_gsu_app_sf.
DR InterPro; IPR012295; TBP_dom_sf.
DR PANTHER; PTHR10261; COATOMER SUBUNIT GAMMA; 1.
DR PANTHER; PTHR10261:SF0; COATOMER SUBUNIT GAMMA-2; 1.
DR Pfam; PF01602; Adaptin_N; 1.
DR Pfam; PF16381; Coatomer_g_Cpla; 1.
DR Pfam; PF08752; COP-gamma_platf; 1.
DR PIRSF; PIRSF037093; Coatomer_gamma_subunit; 1.
DR SUPFAM; SSF48371; ARM repeat; 1.
DR SUPFAM; SSF49348; Clathrin adaptor appendage domain; 1.
DR SUPFAM; SSF55711; Subdomain of clathrin and coatomer appendage domain; 1.
PE 3: Inferred from homology;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490, ECO:0000256|PIRNR:PIRNR037093};
KW Cytoplasmic vesicle {ECO:0000256|ARBA:ARBA00023329,
KW ECO:0000256|PIRNR:PIRNR037093};
KW ER-Golgi transport {ECO:0000256|ARBA:ARBA00022892,
KW ECO:0000256|PIRNR:PIRNR037093};
KW Golgi apparatus {ECO:0000256|ARBA:ARBA00023034,
KW ECO:0000256|PIRNR:PIRNR037093};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|PIRNR:PIRNR037093};
KW Protein transport {ECO:0000256|ARBA:ARBA00022927,
KW ECO:0000256|PIRNR:PIRNR037093};
KW Reference proteome {ECO:0000313|Proteomes:UP000316759};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transport {ECO:0000256|ARBA:ARBA00022448, ECO:0000256|PIRNR:PIRNR037093}.
FT DOMAIN 25..538
FT /note="Clathrin/coatomer adaptor adaptin-like N-terminal"
FT /evidence="ECO:0000259|Pfam:PF01602"
FT DOMAIN 637..780
FT /note="Coatomer gamma subunit appendage Ig-like subdomain"
FT /evidence="ECO:0000259|Pfam:PF08752"
FT DOMAIN 782..905
FT /note="Coatomer subunit gamma C-terminal"
FT /evidence="ECO:0000259|Pfam:PF16381"
SQ SEQUENCE 906 AA; 100767 MW; A1C2C44C12E440B2 CRC64;
MNVLKKDKKD EEEGFGAVYV RADKTSVLQE ARIFNETPIN PKKCIRILTK ILVVIGQGEK
IGRTEATQTF FSITKLFQSS DPNLRRMVYL VIKELSTLAE DVIIVTSSLT KDMTGPEVGF
RGPAIRALCT ITDTTMVQSI ERYLKQAIVD KNPAIASAVL TSAFKLMQYC PDVIKRWVNE
CQEAANSSRV MVQYHALGLL YMIRRKDRLA VTKMIQKFTR SGLRSSYAFC LMLRIVSKQI
DEEGLRGNEQ LFEFMESSLR HKSEMVMYEA ARAIVNLRGT TALGLAPAIS VLQLLCSSPK
PALRYAAVRT LNSVATSHPA ALTSCNLDLE QLVRDSNRSI ATLAITTLLK TGNENNVEPL
LKNVCPFMTE ITDEFKIVVL ESIRALATKY PKKYSVLLNF LSGLLRDSAG YVFKKAVVSV
METIIKTVPE AKNLGLLQLC EFIEDCEHVK LTQRILHLLG REGPFLKRPR QFTRYIYNRV
MLESAPVKCT ATTALARFAA QNEEMLPSIL VLLKRIMLDE DDEVRDRAAF YYYILSSNDA
TLRNTYLLTE EMYLSSSGLE RALLEYTQDS HAAASGRFSL ATVPVAAPAP PSIGLGAELL
PKGVEKGTAA STTRTECLLA GTGDTRAPGG TVSVSERYAE QLKSVPQLVG LGPLFKSSEP
IELSEADTEY VVTCVKHTFP EHLVLQFECT NTMSDQRLED VFVEVDPEDA EFEVLETVRC
KSLPYNTPSN TYVLIRLPDS SGPQSTVFTN TLKFTVKDAD SEPTDTGLPD EYELEDLSLN
ISDHTQRVLR GNFGLAWQEL QSDTEVEEIY VLTKHKTITD TIQQVVEHLG LQPCDRTEQM
QQEKSSHQLL LSGVFRGGHS VLARCKLARI VPEATKQTGT SHGISLQITV RSSNAQISRI
VADAIG
//