ID A0A507C9U9_9FUNG Unreviewed; 128 AA.
AC A0A507C9U9;
DT 18-SEP-2019, integrated into UniProtKB/TrEMBL.
DT 18-SEP-2019, sequence version 1.
DT 13-SEP-2023, entry version 17.
DE RecName: Full=Sm protein F {ECO:0000256|ARBA:ARBA00030144};
GN ORFNames=SeMB42_g06837 {ECO:0000313|EMBL:TPX37857.1};
OS Synchytrium endobioticum.
OC Eukaryota; Fungi; Fungi incertae sedis; Chytridiomycota;
OC Chytridiomycota incertae sedis; Chytridiomycetes; Synchytriales;
OC Synchytriaceae; Synchytrium.
OX NCBI_TaxID=286115 {ECO:0000313|EMBL:TPX37857.1, ECO:0000313|Proteomes:UP000317494};
RN [1] {ECO:0000313|EMBL:TPX37857.1, ECO:0000313|Proteomes:UP000317494}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MB42 {ECO:0000313|EMBL:TPX37857.1,
RC ECO:0000313|Proteomes:UP000317494};
RX PubMed=31209237; DOI=.1038/s41598-019-45128-9;
RA van de Vossenberg B.T.L.H., Warris S., Nguyen H.D.T.,
RA van Gent-Pelzer M.P.E., Joly D.L., van de Geest H.C., Bonants P.J.M.,
RA Smith D.S., Levesque C.A., van der Lee T.A.J.;
RT "Comparative genomics of chytrid fungi reveal insights into the obligate
RT biotrophic and pathogenic lifestyle of Synchytrium endobioticum.";
RL Sci. Rep. 9:8672-8672(2019).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the snRNP Sm proteins family. SmF/LSm6
CC subfamily. {ECO:0000256|ARBA:ARBA00007927}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:TPX37857.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; QEAN01000414; TPX37857.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A507C9U9; -.
DR STRING; 286115.A0A507C9U9; -.
DR VEuPathDB; FungiDB:SeMB42_g06837; -.
DR Proteomes; UP000317494; Unassembled WGS sequence.
DR GO; GO:0120114; C:Sm-like protein family complex; IEA:UniProt.
DR GO; GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0000387; P:spliceosomal snRNP assembly; IEA:InterPro.
DR CDD; cd01722; Sm_F; 1.
DR Gene3D; 2.30.30.100; -; 1.
DR InterPro; IPR016487; Lsm6/sSmF.
DR InterPro; IPR010920; LSM_dom_sf.
DR InterPro; IPR047575; Sm.
DR InterPro; IPR001163; Sm_dom_euk/arc.
DR InterPro; IPR034100; Sm_F.
DR PANTHER; PTHR11021:SF0; SMALL NUCLEAR RIBONUCLEOPROTEIN F; 1.
DR PANTHER; PTHR11021; SMALL NUCLEAR RIBONUCLEOPROTEIN F SNRNP-F; 1.
DR Pfam; PF01423; LSM; 1.
DR SMART; SM00651; Sm; 1.
DR SUPFAM; SSF50182; Sm-like ribonucleoproteins; 1.
DR PROSITE; PS52002; SM; 1.
PE 3: Inferred from homology;
KW mRNA processing {ECO:0000256|ARBA:ARBA00022728};
KW mRNA splicing {ECO:0000256|ARBA:ARBA00023187};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000317494};
KW Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274};
KW Spliceosome {ECO:0000256|ARBA:ARBA00022728}.
FT DOMAIN 48..120
FT /note="Sm"
FT /evidence="ECO:0000259|PROSITE:PS52002"
SQ SEQUENCE 128 AA; 14334 MW; E6B60DE7183BFC66 CRC64;
MRDVVSSFER PAHIAQLARF NIAYLIGRTK TSYAEFDHQA TMSTIPVNPK PFLTGLTGKP
ILVRLKWGQE YKGYLMAVDS YMNLQLANTE EFQDGASTGV LGEVLIRCNN VLYIKQIDED
DGMDTGRG
//
