ID A0A540L5F7_MALBA Unreviewed; 980 AA.
AC A0A540L5F7;
DT 16-OCT-2019, integrated into UniProtKB/TrEMBL.
DT 16-OCT-2019, sequence version 1.
DT 24-JAN-2024, entry version 18.
DE RecName: Full=Clp R domain-containing protein {ECO:0000259|PROSITE:PS51903};
GN ORFNames=C1H46_032723 {ECO:0000313|EMBL:TQD81706.1};
OS Malus baccata (Siberian crab apple) (Pyrus baccata).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Malus.
OX NCBI_TaxID=106549 {ECO:0000313|EMBL:TQD81706.1, ECO:0000313|Proteomes:UP000315295};
RN [1] {ECO:0000313|EMBL:TQD81706.1, ECO:0000313|Proteomes:UP000315295}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Shandingzi {ECO:0000313|Proteomes:UP000315295};
RC TISSUE=Leaves {ECO:0000313|EMBL:TQD81706.1};
RA Chen X.;
RT "Sequencing of a Wild Apple (Malus baccata) Genome Unravels the Differences
RT Between Cultivated and Wild Apple Species Regarding Disease Resistance and
RT Cold Tolerance.";
RL G3 (Bethesda) 9:1785-1793(2019).
CC -!- SIMILARITY: Belongs to the ClpA/ClpB family.
CC {ECO:0000256|ARBA:ARBA00008675, ECO:0000256|RuleBase:RU004432}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:TQD81706.1}.
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DR EMBL; VIEB01000754; TQD81706.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A540L5F7; -.
DR STRING; 106549.A0A540L5F7; -.
DR Proteomes; UP000315295; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0042026; P:protein refolding; IEA:InterPro.
DR GO; GO:0009408; P:response to heat; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR CDD; cd19499; RecA-like_ClpB_Hsp104-like; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 1.10.1780.10; Clp, N-terminal domain; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 3.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003959; ATPase_AAA_core.
DR InterPro; IPR017730; Chaperonin_ClpB.
DR InterPro; IPR019489; Clp_ATPase_C.
DR InterPro; IPR036628; Clp_N_dom_sf.
DR InterPro; IPR004176; Clp_R_dom.
DR InterPro; IPR001270; ClpA/B.
DR InterPro; IPR018368; ClpA/B_CS1.
DR InterPro; IPR028299; ClpA/B_CS2.
DR InterPro; IPR041546; ClpA/ClpB_AAA_lid.
DR InterPro; IPR027417; P-loop_NTPase.
DR NCBIfam; TIGR03346; chaperone_ClpB; 1.
DR PANTHER; PTHR11638; ATP-DEPENDENT CLP PROTEASE; 1.
DR PANTHER; PTHR11638:SF18; HEAT SHOCK PROTEIN 104; 1.
DR Pfam; PF00004; AAA; 1.
DR Pfam; PF07724; AAA_2; 1.
DR Pfam; PF17871; AAA_lid_9; 1.
DR Pfam; PF02861; Clp_N; 2.
DR Pfam; PF10431; ClpB_D2-small; 1.
DR PRINTS; PR00300; CLPPROTEASEA.
DR SMART; SM00382; AAA; 2.
DR SMART; SM01086; ClpB_D2-small; 1.
DR SUPFAM; SSF81923; Double Clp-N motif; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS51903; CLP_R; 1.
DR PROSITE; PS00870; CLPAB_1; 1.
DR PROSITE; PS00871; CLPAB_2; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840, ECO:0000256|RuleBase:RU004432};
KW Chaperone {ECO:0000256|ARBA:ARBA00023186, ECO:0000256|RuleBase:RU004432};
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741,
KW ECO:0000256|RuleBase:RU004432};
KW Reference proteome {ECO:0000313|Proteomes:UP000315295};
KW Repeat {ECO:0000256|ARBA:ARBA00022737, ECO:0000256|PROSITE-
KW ProRule:PRU01251}.
FT DOMAIN 89..233
FT /note="Clp R"
FT /evidence="ECO:0000259|PROSITE:PS51903"
FT COILED 521..620
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 980 AA; 110528 MW; 8E3D267E986DDD7B CRC64;
MASATSLSSG VALVHLPQSG FPKCCDKASV FARPHHSLSF NSRADSSQAF ISRQLTPNGS
FRTGLWRTNR NSRPFVVRCE ASTGRGRITQ QDFTEMAWQA IVSSPEVAKE NKHQIVETEH
LLKALLEQKN GLARRIFSKV GVDSTRLLEA TDKYIQRQPK VFGESAGSML GRDLEALIQR
ARDYKKEYGD SFVSVEHLVL GFSQDQRFGK QLFRDFQISK EALKSAIESV RGRQSVIDQD
PEGKYEALEK YGKDLTAMAK VGKLDPVIGR DDEIRRCIQI LSRRTKNNPV LIGEPGVGKT
AISEGLAQRI VQGDVPQALM NRKLISLDMG ALIAGAKYRG EFEDRLKAVL REVTESEGQI
ILFIDEIHTV VGAGATNGAM DAGNLLKPML GRGELRCIGA TTLDEYRKYI EKDPALERRF
QQVYVDQPTV EDTVSILRGL RERYELHHGV RISDGALVEA AILSDRYISG RFLPDKAIDL
VDEAAAKLKM EITSKPTALD EINRSVLKLE MERLSLTNDT DKSSKERLNR LEAELALLKE
KQSELSEQWE HEKSVMTRIQ SIKEEMDRLN LEIQQAEREY DLNRAAELKY GSLNSLQRQL
VDAEKELDEY MRSGKSMLRE EVTGSDIAEI VSKWTGIPVS KLQQSEMEKL LHLEDELHKR
VVGQEPAVRS VAEAIQRSRA GLSDPHRPIA SFMFMGPTGV GKTELAKALA SYLFNTEETL
VRIDMSEYME KHAVSRLIGA PPGYVGYEEG GQLTEVVRRR PYSVILFDEI EKAHSDVFNV
FLQILDDGRI TDSQGRTVSF TNTVIIMTSN VGSQYILNAD DDNTPKELAY DTIKHRVLEA
ARSIFRPEFM NRVDEYIVFQ PLDREQISRI VKLQLDRVRK RIADRKMKIK VSDAAIELLG
SIGYDPNYGA RPVKRVIQQY VENELAKCIL RGEFREEDTV AIDTEVTAFS SGQLPQQKLV
FRRLETTDSE SPQEAFSEAR
//