ID A0A540NA11_MALBA Unreviewed; 620 AA.
AC A0A540NA11;
DT 16-OCT-2019, integrated into UniProtKB/TrEMBL.
DT 16-OCT-2019, sequence version 1.
DT 24-JAN-2024, entry version 13.
DE RecName: Full=BED-type domain-containing protein {ECO:0000259|PROSITE:PS50808};
GN ORFNames=C1H46_006531 {ECO:0000313|EMBL:TQE07882.1};
OS Malus baccata (Siberian crab apple) (Pyrus baccata).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Malus.
OX NCBI_TaxID=106549 {ECO:0000313|EMBL:TQE07882.1, ECO:0000313|Proteomes:UP000315295};
RN [1] {ECO:0000313|EMBL:TQE07882.1, ECO:0000313|Proteomes:UP000315295}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Shandingzi {ECO:0000313|Proteomes:UP000315295};
RC TISSUE=Leaves {ECO:0000313|EMBL:TQE07882.1};
RA Chen X.;
RT "Sequencing of a Wild Apple (Malus baccata) Genome Unravels the Differences
RT Between Cultivated and Wild Apple Species Regarding Disease Resistance and
RT Cold Tolerance.";
RL G3 (Bethesda) 9:1785-1793(2019).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:TQE07882.1}.
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DR EMBL; VIEB01000079; TQE07882.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A540NA11; -.
DR STRING; 106549.A0A540NA11; -.
DR Proteomes; UP000315295; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR InterPro; IPR007021; DUF659.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR003656; Znf_BED.
DR PANTHER; PTHR32166:SF74; OS01G0379800 PROTEIN; 1.
DR PANTHER; PTHR32166; OSJNBA0013A04.12 PROTEIN; 1.
DR Pfam; PF04937; DUF659; 1.
DR Pfam; PF02892; zf-BED; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50808; ZF_BED; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000315295};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00027}.
FT DOMAIN 27..84
FT /note="BED-type"
FT /evidence="ECO:0000259|PROSITE:PS50808"
FT REGION 1..25
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 620 AA; 70815 MW; CBD1B6B619687E31 CRC64;
MMIGTSSSGA STAMSSSSQS ENVLKRSSED VGWEYGILAN PTNTDKVKCK LCNKIISGGV
HRLKQHVANI RGNVAACTQS SDEDKAKCRA ALEGAKNKKK QRDKHNVEVR EEVQLQQIQE
EEDIEVIGSR KRPRTLGPMD RFASAINPDS SNEGSKNTRQ QNINDAIWKE RAHQVDQYVA
RWVYEAGIPF HAIDNDSFKR VMEAVGQFGP GYLPPSQYEL REPLLKEEVE RVKKSLKKHE
EEWALNGCSI MTDAWSDRKR RSIMNLCVNC KEGTIFLSSK ECSSEAHTGE YIFEYVDKCV
EEIGPQNVIQ VVTDNASNNM AAANMMKKKR RNMFWTSCAT PTLNLMLQGI GNLPRFKGVI
DKAKAFTIFI YAHHKTLALM RKHTKKRDII RPGVTRFATS FLTLQSLMDK KKDLKVMVAS
EEWEQCKHVK TTKGKVAYAT ILSSHFWSGV LLCLKVFEPL FKLLRIVDGD KKPSMGFLYG
ELQKAKMEIK ETFKNNEANY QPILQIIDEK ARERLDSPLH LAGYLFNPYY FFKDQSIQHD
PIVMEGIFTC VEKFFPDNYE VQNQVINVEM HKYRVKEGGF GRHLAELGCV ENDETYNPGM
NIHICLFYLL NLSLLLIFHY
//
