ID A0A553RDS6_9TELE Unreviewed; 1169 AA.
AC A0A553RDS6;
DT 16-OCT-2019, integrated into UniProtKB/TrEMBL.
DT 16-OCT-2019, sequence version 1.
DT 27-MAR-2024, entry version 15.
DE RecName: Full=PHD-type domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=DNTS_009905 {ECO:0000313|EMBL:TRZ00297.1};
OS Danionella translucida.
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Danionidae; Danioninae; Danionella.
OX NCBI_TaxID=623744 {ECO:0000313|EMBL:TRZ00297.1, ECO:0000313|Proteomes:UP000316079};
RN [1] {ECO:0000313|Proteomes:UP000316079}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bolton {ECO:0000313|Proteomes:UP000316079};
RA Kadobianskyi M., Schulze L., Schuelke M., Judkewitz B.;
RT "Hybrid genome assembly and annotation of Danionella translucida.";
RL bioRxiv 0:0-0(2019).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:TRZ00297.1}.
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DR EMBL; SRMA01024547; TRZ00297.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A553RDS6; -.
DR Proteomes; UP000316079; Unassembled WGS sequence.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR CDD; cd15708; ePHD_AF10; 1.
DR CDD; cd15574; PHD_AF10_AF17; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 2.
DR InterPro; IPR049781; AF10/AF17_PHD.
DR InterPro; IPR049775; AF10_ePHD.
DR InterPro; IPR034732; EPHD.
DR InterPro; IPR019786; Zinc_finger_PHD-type_CS.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR001965; Znf_PHD.
DR InterPro; IPR019787; Znf_PHD-finger.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR13793; PHD FINGER PROTEINS; 1.
DR PANTHER; PTHR13793:SF93; PROTEIN AF-10; 1.
DR Pfam; PF13831; PHD_2; 1.
DR Pfam; PF13832; zf-HC5HC2H_2; 1.
DR SMART; SM00249; PHD; 2.
DR SUPFAM; SSF57903; FYVE/PHD zinc finger; 1.
DR PROSITE; PS51805; EPHD; 1.
DR PROSITE; PS01359; ZF_PHD_1; 1.
DR PROSITE; PS50016; ZF_PHD_2; 2.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000316079};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00146}.
FT DOMAIN 23..75
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS50016"
FT DOMAIN 122..241
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS51805"
FT DOMAIN 177..240
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS50016"
FT REGION 88..109
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 244..435
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 499..584
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 609..631
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 713..749
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 873..924
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 970..992
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 300..355
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 389..434
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 499..521
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 538..584
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1169 AA; 123864 MW; 6EFA63C8BBECFB60 CRC64;
MVSSELYLAE QDDDSASNMK EMIGGCCVCS DERGWAENPL VYCDGHGCNV AVHQACYGIV
QVPTGPWFCR KCESQERAAR VIKGWRGRKP SWQTPEGGGQ STTCNKEEED SRLSRSLKTL
NIVRCELCPH KDGALKRTDN GGWAHVVCAL YIPEVEFANV STMEPIVLQS VPTERYYKTC
YICEEQGRES KAATGACMTC NKHGCRQAFH VTCAQLAGLL CEEQGSDADN VKYCGYCKNH
YSKLRSSKGR GSRAQSLSDS STHSLDKHHD REKKKHKERD RHKPKHKKPL ELSPSLVPAL
MVTSEKSFNS SSGGSVSSIS STQKRMDDSG GRFTNANFQE VPSHSSSSSK DGGSSDGKSS
DGKSKKSSHN TSSGSRGRKS APGKPHGPVV TTATSSTAPS SSSPFQQGHL LGNSSKSTTG
GSMIQPSSDF LSFSDPSLRA GDTYTPPAFG RCHMKGATES GASENMVALN TFSMMALPQS
SSSSKPYENC HATELSSLAS AGYKRPQPSS SSSSAASSSS MGEDGVKKKK RGNWRNRYGP
CFTTQDSKTT DATEHVSTMP SSTSTSPSSM SNVPCHGSSV SSTGGVGTSV AVNSTLGIQK
SPSLLRNGSL QGITVSSPPT GPGSYSSSSE VAGPLPTAVL GGSLSVSNSE LPAHQSVVTS
MPTLTSLAPN APFTSTPSTH GNSLAGSFNM APSHMFGNRL NPNSAMSALI AQSEGSPADQ
ELGDGALGFS RRGNSPKTNL SPRSPLSGLH IRYDSGPLVP GLGPGSDTLP PVATSIDQLL
ERQWNEGQQF LLQQAPNSLC LSHLQAPQPP LLPLLYTPAT LTQTSFLPSI RLMEPPLPAQ
LIWSPHSCQV AKSLSPPDML HSKSIQLGSS VLTESSQPLP TQVPLSGGRS SGSSTSSLST
PPSATQSPPQ QQVNGVGIVG VHNQPGNANS SLPALAGVTG LMGALQGNHL AISGIVGALN
GVIQTSPNLA QTSGPLSHPS AATSTSLPTS SSINSTARLF TEQHRQILLH QHQLQQLFHS
QQATPEQQQA LLYQLMQQQQ QKSDVQLQQL PVNSLLPGMQ PAISTNPFLA IHNDSGVPKP
GAAAIKQNKT ANFSDTEHHE GLLFFRIWSF PCEEGAIRRL KDPAALFQEH LPLRPGPNPS
AWPSSPVSQQ ERPCTGDVHF FSPVNVFKN
//
