ID A0A5A7PJQ4_STRAF Unreviewed; 711 AA.
AC A0A5A7PJQ4;
DT 13-NOV-2019, integrated into UniProtKB/TrEMBL.
DT 13-NOV-2019, sequence version 1.
DT 27-MAR-2024, entry version 21.
DE SubName: Full=Transcription initiation factor TFIID subunit 6 {ECO:0000313|EMBL:GER32871.1};
GN ORFNames=STAS_08972 {ECO:0000313|EMBL:GER32871.1};
OS Striga asiatica (Asiatic witchweed) (Buchnera asiatica).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Lamiales; Orobanchaceae; Buchnereae; Striga.
OX NCBI_TaxID=4170 {ECO:0000313|EMBL:GER32871.1, ECO:0000313|Proteomes:UP000325081};
RN [1] {ECO:0000313|Proteomes:UP000325081}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. UVA1 {ECO:0000313|Proteomes:UP000325081};
RX PubMed=31522940; DOI=10.1016/j.cub.2019.07.086;
RA Yoshida S., Kim S., Wafula E.K., Tanskanen J., Kim Y.M., Honaas L.,
RA Yang Z., Spallek T., Conn C.E., Ichihashi Y., Cheong K., Cui S., Der J.P.,
RA Gundlach H., Jiao Y., Hori C., Ishida J.K., Kasahara H., Kiba T., Kim M.S.,
RA Koo N., Laohavisit A., Lee Y.H., Lumba S., McCourt P., Mortimer J.C.,
RA Mutuku J.M., Nomura T., Sasaki-Sekimoto Y., Seto Y., Wang Y., Wakatake T.,
RA Sakakibara H., Demura T., Yamaguchi S., Yoneyama K., Manabe R.I.,
RA Nelson D.C., Schulman A.H., Timko M.P., dePamphilis C.W., Choi D.,
RA Shirasu K.;
RT "Genome Sequence of Striga asiatica Provides Insight into the Evolution of
RT Plant Parasitism.";
RL Curr. Biol. 29:3041-3052.e4(2019).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the TAF6 family.
CC {ECO:0000256|ARBA:ARBA00007688}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:GER32871.1}.
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DR EMBL; BKCP01004639; GER32871.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A5A7PJQ4; -.
DR Proteomes; UP000325081; Unassembled WGS sequence.
DR GO; GO:0000124; C:SAGA complex; IEA:InterPro.
DR GO; GO:0046695; C:SLIK (SAGA-like) complex; IEA:InterPro.
DR GO; GO:0005669; C:transcription factor TFIID complex; IEA:InterPro.
DR GO; GO:0046982; F:protein heterodimerization activity; IEA:InterPro.
DR GO; GO:0016251; F:RNA polymerase II general transcription initiation factor activity; IEA:InterPro.
DR GO; GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
DR GO; GO:0006367; P:transcription initiation at RNA polymerase II promoter; IEA:InterPro.
DR CDD; cd08050; TAF6C; 1.
DR Gene3D; 1.10.20.10; Histone, subunit A; 1.
DR Gene3D; 1.25.40.770; TAF6, C-terminal HEAT repeat domain; 2.
DR InterPro; IPR009072; Histone-fold.
DR InterPro; IPR037796; TAF6.
DR InterPro; IPR011442; TAF6_C.
DR InterPro; IPR046344; TAF6_C_sf.
DR InterPro; IPR004823; TAF_TATA-bd_Histone-like_dom.
DR PANTHER; PTHR10221; TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6; 1.
DR PANTHER; PTHR10221:SF9; TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6; 1.
DR Pfam; PF02969; TAF; 1.
DR Pfam; PF07571; TAF6_C; 2.
DR SMART; SM00803; TAF; 1.
DR SUPFAM; SSF47113; Histone-fold; 1.
PE 3: Inferred from homology;
KW Initiation factor {ECO:0000313|EMBL:GER32871.1};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Protein biosynthesis {ECO:0000313|EMBL:GER32871.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000325081};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 202..268
FT /note="TATA box binding protein associated factor (TAF)
FT histone-like fold"
FT /evidence="ECO:0000259|SMART:SM00803"
SQ SEQUENCE 711 AA; 79258 MW; 8374268851FA677A CRC64;
MIQGYVDIIL DALKNSSSGD PHARRYYPNV SGVVRIAGDE FTTKMIIYNY ITKILDFNER
ILTGATAGDK VLIPKLTIIP SDLRVPLKFQ RKLFSVMVSY AMTINKSQCL NFPIPARLVT
SQPLNLAAGK APFFFRTRLK NKRKSQFGPG RATPSNTRSW RVEIPRLSHV SLRPTSPPSL
SSTCFEIPSH RQFAGGAETL MSIVQKETIE VIAQSVGISN LSPDVLPALA ADVEYRVREI
MQEAIKCMRH SRRTTLTTDD VDSALSLRNV EPIYGFASGD PLRFRRAAGH KDLFYVEEKD
VEFKEVIEAP LPKAPLDTAV IAHWLAVEGV QPAIPENPPP EALQTLSLPS DNRKTEVKEE
GVHIDVKLPI KHVLSRELQL YFEKITELTV SRSESPLFKE ALVSLATDSG IHPLVPYFTY
FIADELHQLM PPVMTCLVAR RLGHKNSDSH WDLRNFSANL VSSICKRFGH VYHDLPKRVT
NTLLHAFLDP SKALPQHYGA IQGLAAMGPN VVLTASLFSP FLYLCVRKLV LPNLEPYLCL
LAPEMQLETQ KNEMKRHEAW LVYGALVRAA GLCLHDRMKR LPSLPSPSAH TVLKSNNKVL
TTVSNKRKAS MDNVMHQPPL KKLVTDNSAG NSLQMDSGHS NVQQSVPYTN NNNIVGSSSG
GKEIISEQGL KVVDQAWKDD VDGQQLLLLL YEYFGESMLS FVPSPEASLF L
//
