ID A0A5A9PF73_9TELE Unreviewed; 711 AA.
AC A0A5A9PF73;
DT 13-NOV-2019, integrated into UniProtKB/TrEMBL.
DT 13-NOV-2019, sequence version 1.
DT 27-MAR-2024, entry version 14.
DE SubName: Full=Nucleolar transcription factor 1-B {ECO:0000313|EMBL:KAA0719327.1};
GN ORFNames=E1301_Tti006583 {ECO:0000313|EMBL:KAA0719327.1};
OS Triplophysa tibetana.
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Nemacheilidae; Triplophysa.
OX NCBI_TaxID=1572043 {ECO:0000313|EMBL:KAA0719327.1, ECO:0000313|Proteomes:UP000324632};
RN [1] {ECO:0000313|EMBL:KAA0719327.1, ECO:0000313|Proteomes:UP000324632}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=TTIB1903HZAU {ECO:0000313|EMBL:KAA0719327.1};
RC TISSUE=Muscle {ECO:0000313|EMBL:KAA0719327.1};
RX PubMed=30977968;
RA Yang X., Liu H., Ma Z., Zou Y., Zou M., Mao Y., Li X., Wang H., Chen T.,
RA Wang W., Yang R.;
RT "Chromosome-level genome assembly of Triplophysa tibetana, a fish adapted
RT to the harsh high-altitude environment of the Tibetan Plateau.";
RL Mol. Ecol. Resour. 19:1027-1036(2019).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KAA0719327.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; SOYY01000007; KAA0719327.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A5A9PF73; -.
DR Proteomes; UP000324632; Chromosome 7.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-UniRule.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR CDD; cd21998; HMG-box_UBF1_rpt1-like; 1.
DR CDD; cd21999; HMG-box_UBF1_rpt2; 1.
DR CDD; cd22000; HMG-box_UBF1_rpt3; 1.
DR CDD; cd22002; HMG-box_UBF1_rpt5; 1.
DR CDD; cd22003; HMG-box_UBF1_rpt6-like; 1.
DR Gene3D; 1.10.30.10; High mobility group box domain; 5.
DR InterPro; IPR029215; HMG_box_5.
DR InterPro; IPR009071; HMG_box_dom.
DR InterPro; IPR036910; HMG_box_dom_sf.
DR PANTHER; PTHR46318; UPSTREAM BINDING TRANSCRIPTION FACTOR; 1.
DR PANTHER; PTHR46318:SF5; UPSTREAM-BINDING TRANSCRIPTION FACTOR,-LIKE; 1.
DR Pfam; PF00505; HMG_box; 2.
DR Pfam; PF14887; HMG_box_5; 1.
DR SMART; SM00398; HMG; 5.
DR SUPFAM; SSF47095; HMG-box; 5.
DR PROSITE; PS50118; HMG_BOX_2; 5.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|PROSITE-
KW ProRule:PRU00267};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PROSITE-
KW ProRule:PRU00267}; Reference proteome {ECO:0000313|Proteomes:UP000324632};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 114..182
FT /note="HMG box"
FT /evidence="ECO:0000259|PROSITE:PS50118"
FT DOMAIN 198..266
FT /note="HMG box"
FT /evidence="ECO:0000259|PROSITE:PS50118"
FT DOMAIN 298..362
FT /note="HMG box"
FT /evidence="ECO:0000259|PROSITE:PS50118"
FT DOMAIN 428..495
FT /note="HMG box"
FT /evidence="ECO:0000259|PROSITE:PS50118"
FT DOMAIN 519..585
FT /note="HMG box"
FT /evidence="ECO:0000259|PROSITE:PS50118"
FT DNA_BIND 114..182
FT /note="HMG box"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00267"
FT DNA_BIND 198..266
FT /note="HMG box"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00267"
FT DNA_BIND 298..362
FT /note="HMG box"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00267"
FT DNA_BIND 428..495
FT /note="HMG box"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00267"
FT DNA_BIND 519..585
FT /note="HMG box"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00267"
FT REGION 416..436
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 503..522
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 593..711
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 164..191
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 416..431
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 653..694
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 711 AA; 83058 MW; 7301A88021CF272B CRC64;
MNGSTSVSST QTGRIKSETD VDTWSKEDCL TLLERIRSLL PEGDGMKYKT TESHFDWEKV
GFGVFTGDMC KQKWQKVSTE VRKYRTMTEV IFDAIEYVKN PYKGKKLKTH PDFPKKPLTP
YFRFFMEKRA KYAKIHPEMS NLDLTKILSK KYKELPEKKK IKYIQEFQSE KEEFEKNMAR
FKEDHPDLIE ERKKSDLPEK PKTPQQLWYN HEKKTYMKIH PDVSQKELKE ALRRQWSQLP
DKKRLKWISR ALELQKHYEE TMRAYLEAHP EINSEEHVKS VLTKAERQLK DKFDGRPTKP
PPNGYSLYCA ELMVNMKDVP STERMVLCSK QWKLMTQREK DSFQKRCEQK KKQYEIDLQR
FIESLPEEER DRVLSEEKLG GNRLNLAGVG SPLRAKSPSV KDRCQNPELD QWMLAKDKRD
GKKKPRLPET PKTPEEMWQQ SVIGDYLVKF RNDRKKAQNA MEAAWKAMEK KEKIPWIKKA
AEDQKRYEVQ YRTVREMLET RTVPTGQGQR KPKFDGEPKK PPVSGYQMFS QELLTSGELN
HFSLKERMVE IGKRWHKLNQ TQKDKYKKQV EEQQLEYKAE LDTWVKSLSP QERAVYKEFS
STKRRSTTKA QGPGAKVRVT KGKAVGARPT AVVVGGGKRS MAYRAKQDTS ESDEDDDKTD
SSDSDDEDDE SSGSTDSDDE DDDENDDEDD DDRSDGSSSS SSEDSSESET D
//
