ID A0A5B6VKJ9_9ROSI Unreviewed; 592 AA.
AC A0A5B6VKJ9;
DT 13-NOV-2019, integrated into UniProtKB/TrEMBL.
DT 13-NOV-2019, sequence version 1.
DT 27-MAR-2024, entry version 8.
DE SubName: Full=Reverse transcriptase {ECO:0000313|EMBL:KAA3469656.1};
GN ORFNames=EPI10_015423 {ECO:0000313|EMBL:KAA3469656.1};
OS Gossypium australe.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=47621 {ECO:0000313|EMBL:KAA3469656.1, ECO:0000313|Proteomes:UP000325315};
RN [1] {ECO:0000313|Proteomes:UP000325315}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. PA1801 {ECO:0000313|Proteomes:UP000325315};
RX PubMed=31479566; DOI=10.1111/pbi.13249;
RA Cai Y., Cai X., Wang Q., Wang P., Zhang Y., Cai C., Xu Y., Wang K.,
RA Zhou Z., Wang C., Geng S., Li B., Dong Q., Hou Y., Wang H., Ai P., Liu Z.,
RA Yi F., Sun M., An G., Cheng J., Zhang Y., Shi Q., Xie Y., Shi X., Chang Y.,
RA Huang F., Chen Y., Hong S., Mi L., Sun Q., Zhang L., Zhou B., Peng R.,
RA Zhang X., Liu F.;
RT "Genome sequencing of the Australian wild diploid species Gossypium
RT australe highlights disease resistance and delayed gland morphogenesis.";
RL Plant Biotechnol. J. 0:0-0(2019).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KAA3469656.1}.
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DR EMBL; SMMG02000006; KAA3469656.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A5B6VKJ9; -.
DR Proteomes; UP000325315; Chromosome 8.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
DR GO; GO:0004523; F:RNA-DNA hybrid ribonuclease activity; IEA:InterPro.
DR CDD; cd06222; RNase_H_like; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR044730; RNase_H-like_dom_plant.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR002156; RNaseH_domain.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR026960; RVT-Znf.
DR PANTHER; PTHR33116:SF77; REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR33116; REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED; 1.
DR Pfam; PF13456; RVT_3; 1.
DR Pfam; PF13966; zf-RVT; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
PE 4: Predicted;
KW Nucleotidyltransferase {ECO:0000313|EMBL:KAA3469656.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000325315};
KW RNA-directed DNA polymerase {ECO:0000313|EMBL:KAA3469656.1};
KW Transferase {ECO:0000313|EMBL:KAA3469656.1}.
FT DOMAIN 327..419
FT /note="Reverse transcriptase zinc-binding"
FT /evidence="ECO:0000259|Pfam:PF13966"
FT DOMAIN 440..561
FT /note="RNase H type-1"
FT /evidence="ECO:0000259|Pfam:PF13456"
SQ SEQUENCE 592 AA; 66968 MW; 77CC9C18CD48D3F0 CRC64;
MRVARKEGFI RGAKASINGP EITHLLFADD CILFGEAINR GTEFLKNILQ VYESCSGQSV
NFSKSTVFYS PNTIEVNNDV VSKLLGVRTA TNPEKYLGLP NMNLVDQILM RIEGWSNGFL
SQGGKEVFIK AVLQAIPTYA MSCFLLPNSL CRTMESIFAK FWWEKGKGRR GIHWCQWSQL
CRPKTEGGLG FRNLAQFNVA LLAKQGWRFL TNPNSLVTRV FKAKYFPRSD FINSQLGNKT
SYVWRSIWAA KGVLEKCLIW KVGTGTSISI YSDVWVPSQV NSRLLTTVDG SNLNKVAELI
DSQSREWNRE IPHEDFLAWS GEHSGEFSVK STYKLLQSFD PRAYAVQNVY KDFYRKLWLI
DLPTKVKINA WKASWNYLPT RANLFYKKLT ADALCPRCGV AAKTIDHLFR ECPLSVEVWS
HIPDTENSWQ RPPRQVVKIN FDGAFDKDSH QSASGIVARN SEGKVIVSST SLHEKVDSAF
AAEAIACRDV VQLGINMQKE DIIVKGDLLT VIKKCRKAAL DKSQIGAFIN DIHQMKAEIK
KLIFDCTLRS ANNLAHILAT ETLKEKEEKY LIGGVPYYAE SHMRNESLQE PD
//
