ID   A0A5C3NB96_9AGAM        Unreviewed;      1111 AA.
AC   A0A5C3NB96;
DT   13-NOV-2019, integrated into UniProtKB/TrEMBL.
DT   13-NOV-2019, sequence version 1.
DT   27-MAR-2024, entry version 19.
DE   SubName: Full=RNA polymerase II-associated protein {ECO:0000313|EMBL:TFK54552.1};
GN   ORFNames=OE88DRAFT_1624687 {ECO:0000313|EMBL:TFK54552.1};
OS   Heliocybe sulcata.
OC   Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes;
OC   Gloeophyllales; Gloeophyllaceae; Heliocybe.
OX   NCBI_TaxID=5364 {ECO:0000313|EMBL:TFK54552.1, ECO:0000313|Proteomes:UP000305948};
RN   [1] {ECO:0000313|EMBL:TFK54552.1, ECO:0000313|Proteomes:UP000305948}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=OMC1185 {ECO:0000313|EMBL:TFK54552.1,
RC   ECO:0000313|Proteomes:UP000305948};
RX   PubMed=30886374; DOI=.1038/s41559-019-0834-1;
RA   Varga T., Krizsan K., Foldi C., Dima B., Sanchez-Garcia M.,
RA   Sanchez-Ramirez S., Szollosi G.J., Szarkandi J.G., Papp V., Albert L.,
RA   Andreopoulos W., Angelini C., Antonin V., Barry K.W., Bougher N.L.,
RA   Buchanan P., Buyck B., Bense V., Catcheside P., Chovatia M., Cooper J.,
RA   Damon W., Desjardin D., Finy P., Geml J., Haridas S., Hughes K., Justo A.,
RA   Karasinski D., Kautmanova I., Kiss B., Kocsube S., Kotiranta H.,
RA   LaButti K.M., Lechner B.E., Liimatainen K., Lipzen A., Lukacs Z.,
RA   Mihaltcheva S., Morgado L.N., Niskanen T., Noordeloos M.E., Ohm R.A.,
RA   Ortiz-Santana B., Ovrebo C., Racz N., Riley R., Savchenko A., Shiryaev A.,
RA   Soop K., Spirin V., Szebenyi C., Tomsovsky M., Tulloss R.E., Uehling J.,
RA   Grigoriev I.V., Vagvolgyi C., Papp T., Martin F.M., Miettinen O.,
RA   Hibbett D.S., Nagy L.G.;
RT   "Megaphylogeny resolves global patterns of mushroom evolution.";
RL   Nat. Ecol. Evol. 3:668-678(2019).
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DR   EMBL; ML213506; TFK54552.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A5C3NB96; -.
DR   STRING; 5364.A0A5C3NB96; -.
DR   Proteomes; UP000305948; Unassembled WGS sequence.
DR   GO; GO:0005634; C:nucleus; IEA:UniProt.
DR   GO; GO:0032991; C:protein-containing complex; IEA:UniProt.
DR   GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR   InterPro; IPR031101; Ctr9.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   InterPro; IPR019734; TPR_repeat.
DR   PANTHER; PTHR14027; RNA POLYMERASE-ASSOCIATED PROTEIN CTR9; 1.
DR   PANTHER; PTHR14027:SF2; RNA POLYMERASE-ASSOCIATED PROTEIN CTR9 HOMOLOG; 1.
DR   Pfam; PF13432; TPR_16; 1.
DR   Pfam; PF14559; TPR_19; 1.
DR   Pfam; PF13174; TPR_6; 1.
DR   SMART; SM00028; TPR; 10.
DR   SUPFAM; SSF48452; TPR-like; 3.
DR   PROSITE; PS50005; TPR; 2.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000305948};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737};
KW   TPR repeat {ECO:0000256|ARBA:ARBA00022803, ECO:0000256|PROSITE-
KW   ProRule:PRU00339}.
FT   REPEAT          190..223
FT                   /note="TPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT   REPEAT          560..593
FT                   /note="TPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT   REGION          924..953
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          990..1111
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        938..953
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1060..1104
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1111 AA;  124731 MW;  253FB29231FABBBC CRC64;
     MNGHARSPSP PGATRSIDIE IGTQEIITIE LDNLDPNPSD IMDLLKEGQC KVWVWTRLAS
     EYWRRGYLDA AERIGQAAVE SFSNNGATAS LPPVYSLLAN IQIARARNAP KVILPNARQD
     DMSKEKPKED YYREAAQMLN SSERAVTESG EGFDPTLAFL TRGIQQLATR SLDDALRTFE
     GVLVQKPTNV VALLGKARIL YARRQFPQAL KLFQQVLQLN PRCLPDPRIG IGLCLWAMNH
     QEKARAAWQR SVDLYPDGWA AQLLLGLEAV NTSKDESKEV TERTQALVMG SKLIETAFRA
     NNRGAAAANA LCELLLMKGN YARALKLSER AIQFADTLSI LTEGYIRAGR VCHAESSYLE
     AGRHYSAANE GNPKHVLAAI GQAQMSMLND EWPAAIHALD TLIQPPNPQK SLEATAILAS
     IRSHQRPGVS SSDMAKEKAS ARELFDRVAK ELHLYEDQLA VNGHANQALP RSLRDIKDDM
     DMHAEVARLW QEDNLDRTAR ALHEALRISE STGQVDPRLL NNLGSLHHLD GRLQEARLAY
     ERALTSAAGL APDVGEGMST SILYNLARAY EDEGDEQLAK DAYEKLLTRH PEYVDAKIRQ
     AHMLVEMNRQ NEAHDLLKQA LSSQSSNMNL RAYYTHFLIN SAALKVTKEF VFATLKDHDK
     HDLYSLCAAG WIQYNQARES REQGSQAVQD RKLGFRRAAE FYEKALQLDS SCAFAAQGLA
     IVTAEDALGF LAGGVPHGSS SEEAQRRFKN ARDALDIFAK VRESINDGSV YVNIGHCHYV
     RDEFDRAIES YESANKRFYD GHNVTVLMCL CRSWYAKSIK DQSFQAMNTA LRYAQQALHL
     QPNDKVTLYN IAMIQQKAAE MMFALPTTKR SLQELERAIE HAGHAQQLFA SLASDPSPQV
     PYSKDIADQR KKYGDSMLRR ADEQLGHQTQ HEAETQARLN AARQKRQEDR ERQEQLEVIQ
     MERLRIQAEE LAEERRKARE QALEWSRQVK DLSDEEDMER PRKQRKTKKQ KGGDISGDEA
     AAGSANEGKR KRRARVKRDN NGVAPELPAA DEEEALFSED EGEKTAKRRG TKKRVVRDDD
     EEDPDGGPGP ARKKQIKSKE YINDSDEEMD D
//