ID A0A5D6YCB3_9STRA Unreviewed; 439 AA.
AC A0A5D6YCB3;
DT 13-NOV-2019, integrated into UniProtKB/TrEMBL.
DT 13-NOV-2019, sequence version 1.
DT 22-FEB-2023, entry version 9.
DE RecName: Full=TATA box binding protein associated factor (TAF) histone-like fold domain-containing protein {ECO:0000259|SMART:SM00803};
DE Flags: Fragment;
GN ORFNames=PybrP1_004919 {ECO:0000313|EMBL:TYZ67839.1};
OS [Pythium] brassicae (nom. inval.).
OC Eukaryota; Sar; Stramenopiles; Oomycota; Pythiales; Pythiaceae;
OC Globisporangium.
OX NCBI_TaxID=1485010 {ECO:0000313|EMBL:TYZ67839.1, ECO:0000313|Proteomes:UP000323770};
RN [1] {ECO:0000313|EMBL:TYZ67839.1, ECO:0000313|Proteomes:UP000323770}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=P1 {ECO:0000313|EMBL:TYZ67839.1,
RC ECO:0000313|Proteomes:UP000323770};
RA Kaundal R., Smith E.A., Mohammadi M., Stanghellini M.;
RT "Complete genome sequence of Pythium brassicum P1, an oomycete root
RT pathogen: insights into its host specificity to brassicaceae.";
RL Submitted (AUG-2019) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the TAF6 family.
CC {ECO:0000256|ARBA:ARBA00007688}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:TYZ67839.1}.
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DR EMBL; SMMQ01000732; TYZ67839.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A5D6YCB3; -.
DR Proteomes; UP000323770; Unassembled WGS sequence.
DR GO; GO:0000124; C:SAGA complex; IEA:InterPro.
DR GO; GO:0046695; C:SLIK (SAGA-like) complex; IEA:InterPro.
DR GO; GO:0005669; C:transcription factor TFIID complex; IEA:InterPro.
DR GO; GO:0046982; F:protein heterodimerization activity; IEA:InterPro.
DR GO; GO:0016251; F:RNA polymerase II general transcription initiation factor activity; IEA:InterPro.
DR GO; GO:0006367; P:transcription initiation at RNA polymerase II promoter; IEA:InterPro.
DR CDD; cd08050; TAF6C; 1.
DR Gene3D; 1.10.20.10; Histone, subunit A; 1.
DR Gene3D; 1.25.40.770; TAF6, C-terminal HEAT repeat domain; 1.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR009072; Histone-fold.
DR InterPro; IPR037796; TAF6.
DR InterPro; IPR011442; TAF6_C.
DR InterPro; IPR046344; TAF6_C_sf.
DR InterPro; IPR004823; TAF_TATA-bd_Histone-like_dom.
DR PANTHER; PTHR10221; TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6; 1.
DR PANTHER; PTHR10221:SF9; TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6; 1.
DR Pfam; PF02969; TAF; 1.
DR Pfam; PF07571; TAF6_C; 1.
DR SMART; SM00803; TAF; 1.
DR SUPFAM; SSF48371; ARM repeat; 1.
DR SUPFAM; SSF47113; Histone-fold; 1.
PE 3: Inferred from homology;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000323770};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 3..68
FT /note="TATA box binding protein associated factor (TAF)
FT histone-like fold"
FT /evidence="ECO:0000259|SMART:SM00803"
FT NON_TER 439
FT /evidence="ECO:0000313|EMBL:TYZ67839.1"
SQ SEQUENCE 439 AA; 48820 MW; 7688D13F79F514FB CRC64;
MSLLRPETLQ VAAQSAGVAA LGDACVRELL PEVELRLREL IQDALKFRSH ARQPALTPQH
VNLALQARNL EALYGFGAPG AARYKQSEEH ASLFFPDDDD ELELSELLNA PLPPVPVQPA
LNVHWLAVDG VQPLIPENEA GEDDASRRTS IKDESFVGQV ERKPLVKHVL TEEMQLYYTN
ITEALKSDDF DAQRAAFTSL ANDPGIHQLL PYFSRFVYEE VKHSSHDLSL LYSLMRVCRC
LLVNQHLRVE LYLHQLLPAI LTCVLGRQLC ENPADDHWAL RKYAAHLVAQ ICDRYGETYE
NIQPRVSKTY HKAITDPSCP FTTQYGALYG MMYLGPLVME GLLFPNLAQY YSRLEPALAS
SNPNLVERLE AQNCLGILVH ASGTYFSMTK SVDRSAAAAA PFSSSSLKSI VALLYDAFGE
SLVPYFRSEG SGSPAMLDL
//
