ID A0A5N5HZK9_9ROSA Unreviewed; 964 AA.
AC A0A5N5HZK9;
DT 26-FEB-2020, integrated into UniProtKB/TrEMBL.
DT 26-FEB-2020, sequence version 1.
DT 24-JAN-2024, entry version 17.
DE SubName: Full=Chaperone protein ClpD {ECO:0000313|EMBL:KAB2633059.1};
GN ORFNames=D8674_029306 {ECO:0000313|EMBL:KAB2633059.1};
OS Pyrus ussuriensis x Pyrus communis.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus.
OX NCBI_TaxID=2448454 {ECO:0000313|EMBL:KAB2633059.1, ECO:0000313|Proteomes:UP000327157};
RN [1] {ECO:0000313|EMBL:KAB2633059.1, ECO:0000313|Proteomes:UP000327157}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=S2 {ECO:0000313|EMBL:KAB2633059.1};
RC TISSUE=Leaf {ECO:0000313|EMBL:KAB2633059.1};
RA Ou C.;
RL Submitted (SEP-2019) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Proteomes:UP000327157}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA Wang F., Wang J., Li S., Zhang Y., Fang M., Ma L., Zhao Y., Jiang S.;
RT "A de novo genome assembly of a pear dwarfing rootstock.";
RL Submitted (OCT-2019) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:KAB2633059.1, ECO:0000313|Proteomes:UP000327157}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=S2 {ECO:0000313|EMBL:KAB2633059.1};
RC TISSUE=Leaf {ECO:0000313|EMBL:KAB2633059.1};
RA Wang F., Wang J., Li S., Zhang Y., Fang M., Ma L., Zhao Y., Jiang S.;
RT "A de novo genome assembly of a pear dwarfing rootstock.";
RL Submitted (NOV-2019) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the ClpA/ClpB family.
CC {ECO:0000256|RuleBase:RU004432}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KAB2633059.1}.
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DR EMBL; SMOL01000120; KAB2633059.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A5N5HZK9; -.
DR Proteomes; UP000327157; Chromosome 6.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR CDD; cd19499; RecA-like_ClpB_Hsp104-like; 1.
DR Gene3D; 1.10.8.60; -; 2.
DR Gene3D; 1.10.1780.10; Clp, N-terminal domain; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR Gene3D; 4.10.860.10; UVR domain; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003959; ATPase_AAA_core.
DR InterPro; IPR019489; Clp_ATPase_C.
DR InterPro; IPR036628; Clp_N_dom_sf.
DR InterPro; IPR004176; Clp_R_dom.
DR InterPro; IPR001270; ClpA/B.
DR InterPro; IPR018368; ClpA/B_CS1.
DR InterPro; IPR028299; ClpA/B_CS2.
DR InterPro; IPR041546; ClpA/ClpB_AAA_lid.
DR InterPro; IPR027417; P-loop_NTPase.
DR PANTHER; PTHR11638; ATP-DEPENDENT CLP PROTEASE; 1.
DR PANTHER; PTHR11638:SF185; ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT; 1.
DR Pfam; PF00004; AAA; 1.
DR Pfam; PF07724; AAA_2; 1.
DR Pfam; PF17871; AAA_lid_9; 1.
DR Pfam; PF02861; Clp_N; 2.
DR Pfam; PF10431; ClpB_D2-small; 1.
DR PRINTS; PR00300; CLPPROTEASEA.
DR SMART; SM00382; AAA; 2.
DR SMART; SM01086; ClpB_D2-small; 1.
DR SUPFAM; SSF81923; Double Clp-N motif; 2.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS51903; CLP_R; 1.
DR PROSITE; PS00870; CLPAB_1; 1.
DR PROSITE; PS00871; CLPAB_2; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840, ECO:0000256|RuleBase:RU004432};
KW Chaperone {ECO:0000256|ARBA:ARBA00023186, ECO:0000256|RuleBase:RU004432};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741,
KW ECO:0000256|RuleBase:RU004432};
KW Reference proteome {ECO:0000313|Proteomes:UP000327157};
KW Repeat {ECO:0000256|ARBA:ARBA00022737, ECO:0000256|PROSITE-
KW ProRule:PRU01251}.
FT DOMAIN 96..261
FT /note="Clp R"
FT /evidence="ECO:0000259|PROSITE:PS51903"
FT REGION 266..287
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 584..606
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 588..604
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 964 AA; 105673 MW; 388D42AA071A6CAA CRC64;
MQVSSSSSSS VLIPSLQWRT PSLNSSTSNC CCTQFFRYDR RSSGGGSQVF SLYPIRLTNP
SPHFASSFLS PFKARTFPTG PTARRKIKLR IVAAVFERFT ERAIKAVIFS QREARALGRN
MVFTQHLLLG LIAEEEQHRH LHPNSHGFLG SGISIDQARE AVGAIWHHHN QSQTSASAEV
DPSSRAASAS ATDVPFSIST KRVLEAALEY SRARAHNFIA PEHIAIGLFT ADDGSAGQVL
KRLGVDVNQL LAEAASRLQV ELVKDGREPS GGFQKSPSKK STASGKKKDK SALDQFCVDL
TARASEGLVD PVIGRDTEVQ RIIQILCRRS KNNPILLGES GVGKTAIVEG LAISIAQADV
PAFLLEKRVM SLDIALLMAG SKERGELEAR ITTLLSDIQK AGNIILFIDE VHTLIESGTV
GQRNKGSSLD IANLIKPPLG RGQLQCIAAT TADEYRLHLE KDKAFARRLQ PVWINEPSQD
DAVRILLGLR EKYEAHHNCR YEPEAIIAAV YLSARYISDR YLPDKAIDLI DEAGSRARMD
AFKRKREQQI CILSKSPDDY WQEIRTVQAM HEVVLATELK NGDASSVDDI REPSSSSSTS
DHEPTVVGPE DIAVVASLWS GVPLQQLTAD DRMLLVGLDE KLRKRVVGQE EAVAAISRAV
KRSRVGLKDP DRPMATLLFC GPTGVGKTEL TKALAASYFG SEEAMLRFDM SEYMERHSVS
KLIGSPPGYV GYGAGGTLTE AIRRRPFTVV VFDEIEKAHP DIFNILLQIF EDGHLTDAQG
RRVSFKNALV VMTSNVGSTI IAKGRGSSIG FLLADDEVTS YAGLKATVME ELKTYFRPEL
LNRIDEVVVF HPLQRAQMLE IVNLMLQELK KRLMSLGMGL EVSESVKGLV CEQGYDRFYG
ARPLRRAITS IIEDPLSEAL LAGGYKPGDT VVIDVDATGN PFIRNGSDQS VRLSNSSVQH
PSCS
//