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Database: UniProt
Entry: A0A5N5HZK9_9ROSA
LinkDB: A0A5N5HZK9_9ROSA
Original site: A0A5N5HZK9_9ROSA 
ID   A0A5N5HZK9_9ROSA        Unreviewed;       964 AA.
AC   A0A5N5HZK9;
DT   26-FEB-2020, integrated into UniProtKB/TrEMBL.
DT   26-FEB-2020, sequence version 1.
DT   24-JAN-2024, entry version 17.
DE   SubName: Full=Chaperone protein ClpD {ECO:0000313|EMBL:KAB2633059.1};
GN   ORFNames=D8674_029306 {ECO:0000313|EMBL:KAB2633059.1};
OS   Pyrus ussuriensis x Pyrus communis.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus.
OX   NCBI_TaxID=2448454 {ECO:0000313|EMBL:KAB2633059.1, ECO:0000313|Proteomes:UP000327157};
RN   [1] {ECO:0000313|EMBL:KAB2633059.1, ECO:0000313|Proteomes:UP000327157}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=S2 {ECO:0000313|EMBL:KAB2633059.1};
RC   TISSUE=Leaf {ECO:0000313|EMBL:KAB2633059.1};
RA   Ou C.;
RL   Submitted (SEP-2019) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|Proteomes:UP000327157}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA   Wang F., Wang J., Li S., Zhang Y., Fang M., Ma L., Zhao Y., Jiang S.;
RT   "A de novo genome assembly of a pear dwarfing rootstock.";
RL   Submitted (OCT-2019) to the EMBL/GenBank/DDBJ databases.
RN   [3] {ECO:0000313|EMBL:KAB2633059.1, ECO:0000313|Proteomes:UP000327157}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=S2 {ECO:0000313|EMBL:KAB2633059.1};
RC   TISSUE=Leaf {ECO:0000313|EMBL:KAB2633059.1};
RA   Wang F., Wang J., Li S., Zhang Y., Fang M., Ma L., Zhao Y., Jiang S.;
RT   "A de novo genome assembly of a pear dwarfing rootstock.";
RL   Submitted (NOV-2019) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: Belongs to the ClpA/ClpB family.
CC       {ECO:0000256|RuleBase:RU004432}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:KAB2633059.1}.
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DR   EMBL; SMOL01000120; KAB2633059.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A5N5HZK9; -.
DR   Proteomes; UP000327157; Chromosome 6.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR   CDD; cd00009; AAA; 1.
DR   CDD; cd19499; RecA-like_ClpB_Hsp104-like; 1.
DR   Gene3D; 1.10.8.60; -; 2.
DR   Gene3D; 1.10.1780.10; Clp, N-terminal domain; 1.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR   Gene3D; 4.10.860.10; UVR domain; 1.
DR   InterPro; IPR003593; AAA+_ATPase.
DR   InterPro; IPR003959; ATPase_AAA_core.
DR   InterPro; IPR019489; Clp_ATPase_C.
DR   InterPro; IPR036628; Clp_N_dom_sf.
DR   InterPro; IPR004176; Clp_R_dom.
DR   InterPro; IPR001270; ClpA/B.
DR   InterPro; IPR018368; ClpA/B_CS1.
DR   InterPro; IPR028299; ClpA/B_CS2.
DR   InterPro; IPR041546; ClpA/ClpB_AAA_lid.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   PANTHER; PTHR11638; ATP-DEPENDENT CLP PROTEASE; 1.
DR   PANTHER; PTHR11638:SF185; ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT; 1.
DR   Pfam; PF00004; AAA; 1.
DR   Pfam; PF07724; AAA_2; 1.
DR   Pfam; PF17871; AAA_lid_9; 1.
DR   Pfam; PF02861; Clp_N; 2.
DR   Pfam; PF10431; ClpB_D2-small; 1.
DR   PRINTS; PR00300; CLPPROTEASEA.
DR   SMART; SM00382; AAA; 2.
DR   SMART; SM01086; ClpB_D2-small; 1.
DR   SUPFAM; SSF81923; Double Clp-N motif; 2.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR   PROSITE; PS51903; CLP_R; 1.
DR   PROSITE; PS00870; CLPAB_1; 1.
DR   PROSITE; PS00871; CLPAB_2; 1.
PE   3: Inferred from homology;
KW   ATP-binding {ECO:0000256|ARBA:ARBA00022840, ECO:0000256|RuleBase:RU004432};
KW   Chaperone {ECO:0000256|ARBA:ARBA00023186, ECO:0000256|RuleBase:RU004432};
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741,
KW   ECO:0000256|RuleBase:RU004432};
KW   Reference proteome {ECO:0000313|Proteomes:UP000327157};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737, ECO:0000256|PROSITE-
KW   ProRule:PRU01251}.
FT   DOMAIN          96..261
FT                   /note="Clp R"
FT                   /evidence="ECO:0000259|PROSITE:PS51903"
FT   REGION          266..287
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          584..606
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        588..604
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   964 AA;  105673 MW;  388D42AA071A6CAA CRC64;
     MQVSSSSSSS VLIPSLQWRT PSLNSSTSNC CCTQFFRYDR RSSGGGSQVF SLYPIRLTNP
     SPHFASSFLS PFKARTFPTG PTARRKIKLR IVAAVFERFT ERAIKAVIFS QREARALGRN
     MVFTQHLLLG LIAEEEQHRH LHPNSHGFLG SGISIDQARE AVGAIWHHHN QSQTSASAEV
     DPSSRAASAS ATDVPFSIST KRVLEAALEY SRARAHNFIA PEHIAIGLFT ADDGSAGQVL
     KRLGVDVNQL LAEAASRLQV ELVKDGREPS GGFQKSPSKK STASGKKKDK SALDQFCVDL
     TARASEGLVD PVIGRDTEVQ RIIQILCRRS KNNPILLGES GVGKTAIVEG LAISIAQADV
     PAFLLEKRVM SLDIALLMAG SKERGELEAR ITTLLSDIQK AGNIILFIDE VHTLIESGTV
     GQRNKGSSLD IANLIKPPLG RGQLQCIAAT TADEYRLHLE KDKAFARRLQ PVWINEPSQD
     DAVRILLGLR EKYEAHHNCR YEPEAIIAAV YLSARYISDR YLPDKAIDLI DEAGSRARMD
     AFKRKREQQI CILSKSPDDY WQEIRTVQAM HEVVLATELK NGDASSVDDI REPSSSSSTS
     DHEPTVVGPE DIAVVASLWS GVPLQQLTAD DRMLLVGLDE KLRKRVVGQE EAVAAISRAV
     KRSRVGLKDP DRPMATLLFC GPTGVGKTEL TKALAASYFG SEEAMLRFDM SEYMERHSVS
     KLIGSPPGYV GYGAGGTLTE AIRRRPFTVV VFDEIEKAHP DIFNILLQIF EDGHLTDAQG
     RRVSFKNALV VMTSNVGSTI IAKGRGSSIG FLLADDEVTS YAGLKATVME ELKTYFRPEL
     LNRIDEVVVF HPLQRAQMLE IVNLMLQELK KRLMSLGMGL EVSESVKGLV CEQGYDRFYG
     ARPLRRAITS IIEDPLSEAL LAGGYKPGDT VVIDVDATGN PFIRNGSDQS VRLSNSSVQH
     PSCS
//
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