ID A0A5N5KNH7_9ROSI Unreviewed; 1231 AA.
AC A0A5N5KNH7;
DT 26-FEB-2020, integrated into UniProtKB/TrEMBL.
DT 26-FEB-2020, sequence version 1.
DT 22-FEB-2023, entry version 8.
DE RecName: Full=C2H2-type domain-containing protein {ECO:0000259|PROSITE:PS00028};
GN ORFNames=DKX38_018615 {ECO:0000313|EMBL:KAB5531945.1};
OS Salix brachista.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix.
OX NCBI_TaxID=2182728 {ECO:0000313|EMBL:KAB5531945.1, ECO:0000313|Proteomes:UP000326939};
RN [1] {ECO:0000313|Proteomes:UP000326939}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. br00 {ECO:0000313|Proteomes:UP000326939};
RX PubMed=31307060; DOI=10.1093/gigascience/giz085;
RA Yang J., Wariss H.M., Tao L., Zhang R., Yun Q., Hollingsworth P., Dao Z.,
RA Luo G., Guo H., Ma Y., Sun W.;
RT "De novo genome assembly of the endangered Acer yangbiense, a plant species
RT with extremely small populations endemic to Yunnan Province, China.";
RL Gigascience 8:0-0(2019).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KAB5531945.1}.
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DR EMBL; VDCV01000012; KAB5531945.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A5N5KNH7; -.
DR Proteomes; UP000326939; Chromosome 12.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR InterPro; IPR006866; DUF627_N.
DR InterPro; IPR006865; DUF629.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR013087; Znf_C2H2_type.
DR PANTHER; PTHR22975:SF9; ECHINUS SPLICE FORM 3; 1.
DR PANTHER; PTHR22975; UBIQUITIN SPECIFIC PROTEINASE; 1.
DR Pfam; PF04781; DUF627; 1.
DR Pfam; PF04780; DUF629; 1.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000326939};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 1204..1226
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 377..398
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS00028"
FT REGION 1..22
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 275..313
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 915..957
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1108..1152
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 278..313
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 925..949
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1231 AA; 138969 MW; BB5CF899F98572D5 CRC64;
MGNRKRPLTS RTKHPPPPSA AETTVAYEET DLYPSLNSVS TELDGSSTIK QECDRALNAL
RRGNHTKALR IMKDSCAKHG GDALIHRVHG TVCVKVASII DDPNSKQRYL KNAIEAARRA
AELSPNSIEF AHFYANLLYE AANDGKEYEE VMKECDRALK IENPIDPAKE SLQEESQQKI
ATAEGRIAHV QGELKNLQQK SNIASISTWM KNLGTGEEIR LIPIRRATED PMEARLVQTR
RPNEIKKATK TQEERRKEIE VRVAAARLLQ KSEIGLGQNE GERSDKGVEV MPGADRRGER
RKYGSNSRKN GTNTERKDWV RAYWNSMSLE MKRKLLKIKV TDLKSYFGSS KNGLASDVLN
EALACSEENK SWRFWVCCRC NEKFVGSDSH LHHVVHEHMG SLMPKMQEVL PQSPDNEWIE
MINSCSWKPL DISSAVKMLC NRGKCQNGSS PEKESLRDGC ISCPVSNNNS GKVYSIEGKE
FDGNQLSIAC TIESWPISED SERAKLLEKI HDVFQALIAH KYLAASHLNK VIKFTMDELQ
SLATGSQLLN HVGQTPICIC FLGAFQLKKV LKFLQELSHS CGIGRSPEES TVVDDMNTGA
KGPEIKENIV LNSDASCLYL DKCLLPLEYA PSACPDDDAT TTTSTIVGNG DGVLPDVDAL
LSWIFAGVSS GEQLQSWIRT KEERMHQGME ILQTLEKEFY HLQSLYERKC EHLSYEQALQ
AVEDLCLEEG KKREIDTLFE HRSYDSALRQ RREKLVENEH DALFISSRFE VDAISNVLKE
ADTLNVNQYG YEDTYGGITS QFCDLESGED GNWRTKDQMH QVETFIEIAI QRQKEQLSIE
LSKIDAQIMR IVTGMQQLEL KLESVSAFDY QSILPSLVKS YMRAHLDDLA EKNATEKSNA
AREAFLAELA LDSKKGTQGR SDNSRNTLEK GKDKRKNKDY KKTKDSKVAA ASEQHLVQDV
TNERGSFPVA SDGDYPNSQC LLFGNGDDLR QQEEFKWKIE IEEEERMLEE SLKYQRRIEN
EAKQKHLAEQ QHKKSHITLP EKLSGGICNI CCDPAADSSE PLINRGYSKS WNAVFMKFPL
NVKWNLMTFH FHKQLMQKSG FPNNLEGMPM TVASEPSTGG NAEGGAFDRR LGRRSRKQKS
SANSSDGKNQ PMSCEMENIE VGIITPNLGD GATKTLRQLH VEDDDEERFQ TELERAVRQS
LGKFLLILCF LSLYFTTFYD CTFLTMPTTW A
//
