ID   A0A5N5PBJ1_PANHP        Unreviewed;       823 AA.
AC   A0A5N5PBJ1;
DT   26-FEB-2020, integrated into UniProtKB/TrEMBL.
DT   26-FEB-2020, sequence version 1.
DT   24-JAN-2024, entry version 11.
DE   RecName: Full=Intraflagellar transport 88 homolog {ECO:0008006|Google:ProtNLM};
GN   ORFNames=PHYPO_G00204330 {ECO:0000313|EMBL:KAB5576944.1};
OS   Pangasianodon hypophthalmus (Striped catfish) (Helicophagus hypophthalmus).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes;
OC   Pangasiidae; Pangasianodon.
OX   NCBI_TaxID=310915 {ECO:0000313|EMBL:KAB5576944.1, ECO:0000313|Proteomes:UP000327468};
RN   [1] {ECO:0000313|EMBL:KAB5576944.1, ECO:0000313|Proteomes:UP000327468}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Indonesia {ECO:0000313|EMBL:KAB5576944.1,
RC   ECO:0000313|Proteomes:UP000327468};
RC   TISSUE=Blood {ECO:0000313|EMBL:KAB5576944.1};
RA   Wen M., Zahm M., Roques C., Cabau C., Klopp C., Donnadieu C., Jouanno E.,
RA   Avarre J.-C., Campet M., Ha T.T.T., Dugue R., Lampietro C., Louis A.,
RA   Herpin A., Echchiki A., Berthelot C., Parey E., Roest-Crollius H.,
RA   Braasch I., Postlethwait J., Bobe J., Montfort J., Bouchez O., Begum T.,
RA   Schartl M., Guiguen Y.;
RT   "A chromosome-scale genome assembly of the striped catfish, Pangasianodon
RT   hypophthalmus.";
RL   Submitted (JUN-2019) to the EMBL/GenBank/DDBJ databases.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:KAB5576944.1}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; VFJC01000006; KAB5576944.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A5N5PBJ1; -.
DR   Proteomes; UP000327468; Chromosome 5.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 2.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   InterPro; IPR019734; TPR_repeat.
DR   PANTHER; PTHR44117; INTRAFLAGELLAR TRANSPORT PROTEIN 88 HOMOLOG; 1.
DR   PANTHER; PTHR44117:SF1; INTRAFLAGELLAR TRANSPORT PROTEIN 88 HOMOLOG; 1.
DR   Pfam; PF13424; TPR_12; 2.
DR   Pfam; PF13432; TPR_16; 2.
DR   Pfam; PF13181; TPR_8; 1.
DR   SMART; SM00028; TPR; 11.
DR   SUPFAM; SSF48452; TPR-like; 2.
DR   PROSITE; PS50005; TPR; 6.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000327468};
KW   TPR repeat {ECO:0000256|PROSITE-ProRule:PRU00339}.
FT   REPEAT          271..304
FT                   /note="TPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT   REPEAT          484..517
FT                   /note="TPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT   REPEAT          518..551
FT                   /note="TPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT   REPEAT          552..585
FT                   /note="TPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT   REPEAT          586..619
FT                   /note="TPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT   REPEAT          620..653
FT                   /note="TPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT   REGION          105..132
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          721..823
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        721..739
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        740..754
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   823 AA;  93428 MW;  948034EBCB039430 CRC64;
     MENVHLVTED EDDLYSGYND YNPTFDSEEL DNDIGFQQAV RTSHGKRPPM TAKFPGTAVG
     GRPVGTSFGL RTAMGSSMGR PMTGAVQDGA ARPMTAVRAA GYSSSLTRGS TFDPLGQSRG
     PAPPLEAKNE DTPEEKIKIL EKKVNDLIEE SCMGHANGDL QLALEKAKEA GRKERVLLRQ
     REQTGTADHI NLDLTYSALF NLANQYANND MNTEALNTYQ VIVKNKMFNN AGRLKVNMAN
     IYFKQKNYPM AIKFYRMALD QISNVHTEMR IKIMQNIGIA FIRMGQYSDA ITSFEHIMSE
     SPNIKTGFNL ILCYYAIGDR KMMKKSFQKL ICVPLGIDED EKYIPSNDDP HASLLIEAIK
     NDQLRQMERE RKALAEKYIM TSAKLIAPAI ESTFAAGFDW CVDMVKGSQY VELANDLEIN
     KAITYLRQRN FNQAVDTLKA FEKKDSRVKS AAATNLSFLY FWEKDFDQAD RYAELAMNAD
     RYNPAALINK GNTVFVKQDY EKAAEFYKEA LRNDSSCTEA LYNLGLTYKK LGRLEEALDC
     FLKLHAILRN SDQVMYQLAN LYEMLEDPHQ AIEWLMQLIS VTPTDPHVLA KLGELYDNEG
     DKSQAFQYYY ESFRYFPSNI HVIEWLGAYY IDTQFCEKAI QYFERATLIQ PNHVVWQLMV
     ASCYRRSGNY QRALETYKDI HRKFPENAEC LRFLVRLCTD MGLKEVQDYA TKLKKVEKMK
     EIREQRVKSG RENSARGRRE GSASSDSGQS SHGASAKGER LGVKLRSLPG PHEPYEASTP
     GDIDASYVDP LGPQMERPKT AAKKRTEEDE FADEELGDDL LPE
//