ID A0A5N5T055_9CRUS Unreviewed; 81 AA.
AC A0A5N5T055;
DT 26-FEB-2020, integrated into UniProtKB/TrEMBL.
DT 26-FEB-2020, sequence version 1.
DT 27-MAR-2024, entry version 15.
DE SubName: Full=U6 snRNA-associated Sm-like protein LSm6 {ECO:0000313|EMBL:KAB7499577.1};
GN Name=Lsm6 {ECO:0000313|EMBL:KAB7499577.1};
GN ORFNames=Anas_06079 {ECO:0000313|EMBL:KAB7499577.1};
OS Armadillidium nasatum.
OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea;
OC Malacostraca; Eumalacostraca; Peracarida; Isopoda; Oniscidea; Crinocheta;
OC Armadillidiidae; Armadillidium.
OX NCBI_TaxID=96803 {ECO:0000313|EMBL:KAB7499577.1, ECO:0000313|Proteomes:UP000326759};
RN [1] {ECO:0000313|EMBL:KAB7499577.1, ECO:0000313|Proteomes:UP000326759}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ANa2 {ECO:0000313|EMBL:KAB7499577.1};
RC TISSUE=Whole body excluding digestive tract and cuticle
RC {ECO:0000313|EMBL:KAB7499577.1};
RX PubMed=31600190; DOI=.1371/journal.pbio.3000438;
RA Becking T., Chebbi M.A., Giraud I., Moumen B., Laverre T., Caubet Y.,
RA Peccoud J., Gilbert C., Cordaux R.;
RT "Sex chromosomes control vertical transmission of feminizing Wolbachia
RT symbionts in an isopod.";
RL PLoS Biol. 17:e3000438-e3000438(2019).
CC -!- FUNCTION: Plays a role in pre-mRNA splicing as a core component of the
CC spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins
CC (snRNPs), the building blocks of the spliceosome.
CC {ECO:0000256|PIRNR:PIRNR006609}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
CC Nucleus {ECO:0000256|PIRNR:PIRNR006609}.
CC -!- SIMILARITY: Belongs to the snRNP Sm proteins family. SmF/LSm6
CC subfamily. {ECO:0000256|ARBA:ARBA00007927,
CC ECO:0000256|PIRNR:PIRNR006609}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KAB7499577.1}.
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DR EMBL; SEYY01017825; KAB7499577.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A5N5T055; -.
DR Proteomes; UP000326759; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0120114; C:Sm-like protein family complex; IEA:UniProt.
DR GO; GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0000398; P:mRNA splicing, via spliceosome; IEA:InterPro.
DR GO; GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
DR GO; GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
DR Gene3D; 2.30.30.100; -; 1.
DR InterPro; IPR016487; Lsm6/sSmF.
DR InterPro; IPR010920; LSM_dom_sf.
DR InterPro; IPR001163; Sm_dom_euk/arc.
DR PANTHER; PTHR11021; SMALL NUCLEAR RIBONUCLEOPROTEIN F SNRNP-F; 1.
DR PANTHER; PTHR11021:SF1; U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM6; 1.
DR Pfam; PF01423; LSM; 1.
DR SMART; SM00651; Sm; 1.
DR SUPFAM; SSF50182; Sm-like ribonucleoproteins; 1.
PE 3: Inferred from homology;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW mRNA processing {ECO:0000256|PIRNR:PIRNR006609};
KW mRNA splicing {ECO:0000256|ARBA:ARBA00023187,
KW ECO:0000256|PIRNR:PIRNR006609}; Nucleus {ECO:0000256|PIRNR:PIRNR006609};
KW Reference proteome {ECO:0000313|Proteomes:UP000326759};
KW Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274,
KW ECO:0000256|PIRNR:PIRNR006609};
KW RNA-binding {ECO:0000256|PIRNR:PIRNR006609};
KW rRNA processing {ECO:0000256|ARBA:ARBA00022552};
KW Spliceosome {ECO:0000256|ARBA:ARBA00022728, ECO:0000256|PIRNR:PIRNR006609};
KW tRNA processing {ECO:0000256|ARBA:ARBA00022694}.
FT DOMAIN 2..75
FT /note="Sm"
FT /evidence="ECO:0000259|SMART:SM00651"
SQ SEQUENCE 81 AA; 9339 MW; E28D87CE7E57BFDC CRC64;
MNVVKVEIEE KIQLKRNEEE CQGNINLVEE WSVLACLDGY MNIALEQSEE YLNGQLKNKY
GDAFIRGNNV LYISTQKRRG G
//
