ID A0A662YJ39_9STRA Unreviewed; 167 AA.
AC A0A662YJ39;
DT 22-APR-2020, integrated into UniProtKB/TrEMBL.
DT 22-APR-2020, sequence version 1.
DT 24-JAN-2024, entry version 14.
DE RecName: Full=Sm protein F {ECO:0000256|ARBA:ARBA00030144};
GN ORFNames=BBJ28_00016543 {ECO:0000313|EMBL:RLN98932.1};
OS Nothophytophthora sp. Chile5.
OC Eukaryota; Sar; Stramenopiles; Oomycota; Peronosporales; Peronosporaceae;
OC Nothophytophthora.
OX NCBI_TaxID=2483409 {ECO:0000313|EMBL:RLN98932.1, ECO:0000313|Proteomes:UP000274840};
RN [1] {ECO:0000313|EMBL:RLN98932.1, ECO:0000313|Proteomes:UP000274840}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Chile5 {ECO:0000313|EMBL:RLN98932.1};
RA Studholme D.J., Sanfuentes E., Panda P., Hill R., Sambles C., Grant M.,
RA Williams N.M., Mcdougal R.L.;
RT "Genome sequencing of oomycete isolates from Chile give support for New
RT Zealand origin for Phytophthora kernoviae and make available the first
RT Nothophytophthora sp. genome.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RLN98932.1}.
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DR EMBL; MBAC02000018; RLN98932.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A662YJ39; -.
DR Proteomes; UP000274840; Unassembled WGS sequence.
DR GO; GO:0120114; C:Sm-like protein family complex; IEA:UniProt.
DR GO; GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0000387; P:spliceosomal snRNP assembly; IEA:InterPro.
DR CDD; cd01722; Sm_F; 1.
DR Gene3D; 2.30.30.100; -; 1.
DR InterPro; IPR016487; Lsm6/sSmF.
DR InterPro; IPR010920; LSM_dom_sf.
DR InterPro; IPR047575; Sm.
DR InterPro; IPR001163; Sm_dom_euk/arc.
DR InterPro; IPR034100; Sm_F.
DR PANTHER; PTHR11021:SF0; SMALL NUCLEAR RIBONUCLEOPROTEIN F; 1.
DR PANTHER; PTHR11021; SMALL NUCLEAR RIBONUCLEOPROTEIN F SNRNP-F; 1.
DR Pfam; PF01423; LSM; 1.
DR SMART; SM00651; Sm; 1.
DR SUPFAM; SSF50182; Sm-like ribonucleoproteins; 1.
DR PROSITE; PS52002; SM; 1.
PE 4: Predicted;
KW mRNA processing {ECO:0000256|ARBA:ARBA00022728};
KW mRNA splicing {ECO:0000256|ARBA:ARBA00023187};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000274840};
KW Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274};
KW Spliceosome {ECO:0000256|ARBA:ARBA00022728}.
FT DOMAIN 76..148
FT /note="Sm"
FT /evidence="ECO:0000259|PROSITE:PS52002"
SQ SEQUENCE 167 AA; 18415 MW; 4426DC13EECA1ADD CRC64;
MAGNKQLHAI REELFPKSFA FDQTRRENGA WEAALAAAEP WGWSWWEGRV KEEIALTVVR
VGGFAVLCGK AGLILNPKPF LTNLTGKPVV ARLKWGMEYK GVLLSVDSYM NLQLANTEEY
INGELAGNLG EVLVRCNNVL FIRGLVDDEK PPAEAPEDGA EPMTDAQ
//
