ID A0A667WLI7_9TELE Unreviewed; 880 AA.
AC A0A667WLI7;
DT 17-JUN-2020, integrated into UniProtKB/TrEMBL.
DT 17-JUN-2020, sequence version 1.
DT 24-JAN-2024, entry version 15.
DE SubName: Full=XPC complex subunit, DNA damage recognition and repair factor {ECO:0000313|Ensembl:ENSMMDP00005002567.1};
GN Name=xpc {ECO:0000313|Ensembl:ENSMMDP00005002567.1};
OS Myripristis murdjan (pinecone soldierfish).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC Holocentriformes; Holocentridae; Myripristis.
OX NCBI_TaxID=586833 {ECO:0000313|Ensembl:ENSMMDP00005002567.1, ECO:0000313|Proteomes:UP000472263};
RN [1] {ECO:0000313|Ensembl:ENSMMDP00005002567.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (SEP-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the XPC family. {ECO:0000256|ARBA:ARBA00009525}.
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DR AlphaFoldDB; A0A667WLI7; -.
DR Ensembl; ENSMMDT00005002608.1; ENSMMDP00005002567.1; ENSMMDG00005001300.1.
DR GeneTree; ENSGT00390000005194; -.
DR Proteomes; UP000472263; Unplaced.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003684; F:damaged DNA binding; IEA:InterPro.
DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro.
DR CDD; cd21393; sm_acid_XPC-like; 1.
DR Gene3D; 2.20.20.110; Rad4, beta-hairpin domain BHD1; 1.
DR Gene3D; 3.30.70.2460; Rad4, beta-hairpin domain BHD3; 1.
DR Gene3D; 3.90.260.10; Transglutaminase-like; 1.
DR InterPro; IPR018327; BHD_2.
DR InterPro; IPR004583; DNA_repair_Rad4.
DR InterPro; IPR018026; DNA_repair_Rad4-like.
DR InterPro; IPR038765; Papain-like_cys_pep_sf.
DR InterPro; IPR018325; Rad4/PNGase_transGLS-fold.
DR InterPro; IPR018326; Rad4_beta-hairpin_dom1.
DR InterPro; IPR018328; Rad4_beta-hairpin_dom3.
DR InterPro; IPR042488; Rad4_BHD3_sf.
DR InterPro; IPR036985; Transglutaminase-like_sf.
DR NCBIfam; TIGR00605; rad4; 1.
DR PANTHER; PTHR12135:SF0; DNA REPAIR PROTEIN COMPLEMENTING XP-C CELLS; 1.
DR PANTHER; PTHR12135; DNA REPAIR PROTEIN XP-C / RAD4; 1.
DR Pfam; PF10403; BHD_1; 1.
DR Pfam; PF10404; BHD_2; 1.
DR Pfam; PF10405; BHD_3; 1.
DR Pfam; PF03835; Rad4; 1.
DR SMART; SM01030; BHD_1; 1.
DR SMART; SM01031; BHD_2; 1.
DR SMART; SM01032; BHD_3; 1.
DR SUPFAM; SSF54001; Cysteine proteinases; 1.
PE 3: Inferred from homology;
KW DNA damage {ECO:0000256|ARBA:ARBA00022763};
KW DNA repair {ECO:0000256|ARBA:ARBA00023204};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000472263}.
FT DOMAIN 558..610
FT /note="Rad4 beta-hairpin"
FT /evidence="ECO:0000259|SMART:SM01030"
FT DOMAIN 612..671
FT /note="Rad4 beta-hairpin"
FT /evidence="ECO:0000259|SMART:SM01031"
FT DOMAIN 678..752
FT /note="Rad4 beta-hairpin"
FT /evidence="ECO:0000259|SMART:SM01032"
FT REGION 1..151
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 317..456
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 793..880
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..20
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 30..55
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 115..134
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 317..342
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 364..388
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 429..456
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 880 AA; 99398 MW; 24BCD581BE8A3F81 CRC64;
MAKRKESAET EADTKKLRQG AKAKSRAARP RARREPGNGI AEEEEKLERK VKPKVRSSSK
PAGVPAALVS SKYFHSPVKE EEESDDDDFD DFDLVTTPPP AVKAEAVKKT VKEEEEDEDE
SEEDDWEEVE ELAEPLGPVE PPEPVLPSQP VEIEIETPDI MHKRQRREKR KAEFEAYLRR
MVNRFNKDLL MDTHKVHLMC LIANGMFRNR VCSEPDLLAV TLSLLPVHFT KVAKGRIDQN
YLSGLLKWFG ATFTLNPSLP CEERPDLRAL LERRLASLSA KNHQEMTHLF LLVLRSLQLF
CRLVLSLQPV SLKLPPAKKA KKKEVKEEDE EEEVEKSAKA GGQKPKNAKR RSVASKVSYK
EESNSEGDEE EAGGLSEEEF QASGEEESED SEGGAKSRRG KNGKGKSKAK TSSKNGSNTA
PKRRSGGGKK KAKNDEEEDE DKGTKRRSGR KRDGPGADEW LEVYLDKSSC WVCVDVEHGV
GLPLLCSQNA TAPVTYVVSV DGDGFLKDLG RKYDPTWMTS SRKRRVDDDW WEETLEPFLG
PEDERDMKED KELHAKLLDK PLPTSIAEYK NHPLYALTRH LLKYEALYPA TAAVLGYCRG
EPVYSRDCVH TLHSRDTWLK EARTVRLGEE PYKMVRGFSN RSRKARMMSE QKDEKDLPLF
GEWQTEEYQP PVAVDGKVPR NDYGNVYLFK PCMLPVGCVH LRLPNLHRVA RKLDLDAAPA
VTGFDFHGGY SHAVTDGYIV CEEHEELLRA AWVEEQEVQK QKEKEKQEKR AIANWTLLVK
GLLIRERLQR RYGKKNQGPG GLIHTQDREG AGALSSDEEA GEGGGAPGAK TAAETLAMSW
PQNRQDEQQE DGKSASGLKK KTTKREKRGQ EKHLFPFEKV
//