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Database: UniProt
Entry: A0A667WLI7_9TELE
LinkDB: A0A667WLI7_9TELE
Original site: A0A667WLI7_9TELE 
ID   A0A667WLI7_9TELE        Unreviewed;       880 AA.
AC   A0A667WLI7;
DT   17-JUN-2020, integrated into UniProtKB/TrEMBL.
DT   17-JUN-2020, sequence version 1.
DT   24-JAN-2024, entry version 15.
DE   SubName: Full=XPC complex subunit, DNA damage recognition and repair factor {ECO:0000313|Ensembl:ENSMMDP00005002567.1};
GN   Name=xpc {ECO:0000313|Ensembl:ENSMMDP00005002567.1};
OS   Myripristis murdjan (pinecone soldierfish).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC   Holocentriformes; Holocentridae; Myripristis.
OX   NCBI_TaxID=586833 {ECO:0000313|Ensembl:ENSMMDP00005002567.1, ECO:0000313|Proteomes:UP000472263};
RN   [1] {ECO:0000313|Ensembl:ENSMMDP00005002567.1}
RP   IDENTIFICATION.
RG   Ensembl;
RL   Submitted (SEP-2023) to UniProtKB.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC   -!- SIMILARITY: Belongs to the XPC family. {ECO:0000256|ARBA:ARBA00009525}.
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DR   AlphaFoldDB; A0A667WLI7; -.
DR   Ensembl; ENSMMDT00005002608.1; ENSMMDP00005002567.1; ENSMMDG00005001300.1.
DR   GeneTree; ENSGT00390000005194; -.
DR   Proteomes; UP000472263; Unplaced.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003684; F:damaged DNA binding; IEA:InterPro.
DR   GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro.
DR   CDD; cd21393; sm_acid_XPC-like; 1.
DR   Gene3D; 2.20.20.110; Rad4, beta-hairpin domain BHD1; 1.
DR   Gene3D; 3.30.70.2460; Rad4, beta-hairpin domain BHD3; 1.
DR   Gene3D; 3.90.260.10; Transglutaminase-like; 1.
DR   InterPro; IPR018327; BHD_2.
DR   InterPro; IPR004583; DNA_repair_Rad4.
DR   InterPro; IPR018026; DNA_repair_Rad4-like.
DR   InterPro; IPR038765; Papain-like_cys_pep_sf.
DR   InterPro; IPR018325; Rad4/PNGase_transGLS-fold.
DR   InterPro; IPR018326; Rad4_beta-hairpin_dom1.
DR   InterPro; IPR018328; Rad4_beta-hairpin_dom3.
DR   InterPro; IPR042488; Rad4_BHD3_sf.
DR   InterPro; IPR036985; Transglutaminase-like_sf.
DR   NCBIfam; TIGR00605; rad4; 1.
DR   PANTHER; PTHR12135:SF0; DNA REPAIR PROTEIN COMPLEMENTING XP-C CELLS; 1.
DR   PANTHER; PTHR12135; DNA REPAIR PROTEIN XP-C / RAD4; 1.
DR   Pfam; PF10403; BHD_1; 1.
DR   Pfam; PF10404; BHD_2; 1.
DR   Pfam; PF10405; BHD_3; 1.
DR   Pfam; PF03835; Rad4; 1.
DR   SMART; SM01030; BHD_1; 1.
DR   SMART; SM01031; BHD_2; 1.
DR   SMART; SM01032; BHD_3; 1.
DR   SUPFAM; SSF54001; Cysteine proteinases; 1.
PE   3: Inferred from homology;
KW   DNA damage {ECO:0000256|ARBA:ARBA00022763};
KW   DNA repair {ECO:0000256|ARBA:ARBA00023204};
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW   Reference proteome {ECO:0000313|Proteomes:UP000472263}.
FT   DOMAIN          558..610
FT                   /note="Rad4 beta-hairpin"
FT                   /evidence="ECO:0000259|SMART:SM01030"
FT   DOMAIN          612..671
FT                   /note="Rad4 beta-hairpin"
FT                   /evidence="ECO:0000259|SMART:SM01031"
FT   DOMAIN          678..752
FT                   /note="Rad4 beta-hairpin"
FT                   /evidence="ECO:0000259|SMART:SM01032"
FT   REGION          1..151
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          317..456
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          793..880
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1..20
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        30..55
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        115..134
FT                   /note="Acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        317..342
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        364..388
FT                   /note="Acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        429..456
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   880 AA;  99398 MW;  24BCD581BE8A3F81 CRC64;
     MAKRKESAET EADTKKLRQG AKAKSRAARP RARREPGNGI AEEEEKLERK VKPKVRSSSK
     PAGVPAALVS SKYFHSPVKE EEESDDDDFD DFDLVTTPPP AVKAEAVKKT VKEEEEDEDE
     SEEDDWEEVE ELAEPLGPVE PPEPVLPSQP VEIEIETPDI MHKRQRREKR KAEFEAYLRR
     MVNRFNKDLL MDTHKVHLMC LIANGMFRNR VCSEPDLLAV TLSLLPVHFT KVAKGRIDQN
     YLSGLLKWFG ATFTLNPSLP CEERPDLRAL LERRLASLSA KNHQEMTHLF LLVLRSLQLF
     CRLVLSLQPV SLKLPPAKKA KKKEVKEEDE EEEVEKSAKA GGQKPKNAKR RSVASKVSYK
     EESNSEGDEE EAGGLSEEEF QASGEEESED SEGGAKSRRG KNGKGKSKAK TSSKNGSNTA
     PKRRSGGGKK KAKNDEEEDE DKGTKRRSGR KRDGPGADEW LEVYLDKSSC WVCVDVEHGV
     GLPLLCSQNA TAPVTYVVSV DGDGFLKDLG RKYDPTWMTS SRKRRVDDDW WEETLEPFLG
     PEDERDMKED KELHAKLLDK PLPTSIAEYK NHPLYALTRH LLKYEALYPA TAAVLGYCRG
     EPVYSRDCVH TLHSRDTWLK EARTVRLGEE PYKMVRGFSN RSRKARMMSE QKDEKDLPLF
     GEWQTEEYQP PVAVDGKVPR NDYGNVYLFK PCMLPVGCVH LRLPNLHRVA RKLDLDAAPA
     VTGFDFHGGY SHAVTDGYIV CEEHEELLRA AWVEEQEVQK QKEKEKQEKR AIANWTLLVK
     GLLIRERLQR RYGKKNQGPG GLIHTQDREG AGALSSDEEA GEGGGAPGAK TAAETLAMSW
     PQNRQDEQQE DGKSASGLKK KTTKREKRGQ EKHLFPFEKV
//
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