ID   A0A6A2Z3U4_HIBSY        Unreviewed;       903 AA.
AC   A0A6A2Z3U4;
DT   17-JUN-2020, integrated into UniProtKB/TrEMBL.
DT   17-JUN-2020, sequence version 1.
DT   27-MAR-2024, entry version 11.
DE   RecName: Full=RNase H type-1 domain-containing protein {ECO:0008006|Google:ProtNLM};
GN   ORFNames=F3Y22_tig00111069pilonHSYRG00104
GN   {ECO:0000313|EMBL:KAE8686346.1};
OS   Hibiscus syriacus (Rose of Sharon).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Malvales; Malvaceae; Malvoideae; Hibiscus.
OX   NCBI_TaxID=106335 {ECO:0000313|EMBL:KAE8686346.1, ECO:0000313|Proteomes:UP000436088};
RN   [1] {ECO:0000313|EMBL:KAE8686346.1, ECO:0000313|Proteomes:UP000436088}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Baekdansim {ECO:0000313|Proteomes:UP000436088};
RC   TISSUE=Leaf {ECO:0000313|EMBL:KAE8686346.1};
RA   Kim Y.-M.;
RT   "Draft genome information of white flower Hibiscus syriacus.";
RL   Submitted (SEP-2019) to the EMBL/GenBank/DDBJ databases.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:KAE8686346.1}.
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DR   EMBL; VEPZ02001219; KAE8686346.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A6A2Z3U4; -.
DR   Proteomes; UP000436088; Unassembled WGS sequence.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0004523; F:RNA-DNA hybrid ribonuclease activity; IEA:InterPro.
DR   CDD; cd06222; RNase_H_like; 1.
DR   Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR   InterPro; IPR044730; RNase_H-like_dom_plant.
DR   InterPro; IPR002156; RNaseH_domain.
DR   InterPro; IPR036397; RNaseH_sf.
DR   InterPro; IPR026960; RVT-Znf.
DR   PANTHER; PTHR46890:SF32; NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN; 1.
DR   PANTHER; PTHR46890; NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED; 1.
DR   Pfam; PF13456; RVT_3; 1.
DR   Pfam; PF13966; zf-RVT; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000436088}.
FT   DOMAIN          618..705
FT                   /note="Reverse transcriptase zinc-binding"
FT                   /evidence="ECO:0000259|Pfam:PF13966"
FT   DOMAIN          759..880
FT                   /note="RNase H type-1"
FT                   /evidence="ECO:0000259|Pfam:PF13456"
SQ   SEQUENCE   903 AA;  102724 MW;  2CBC90B60BC92212 CRC64;
     MERVRRKCGF LFGIDVVAEG SRSGLSFGWK PDWVVELQSY SRSHNDVIIR ESVEVVWRFT
     CFNGILEDCG RSDAWDLLRH LGSDQSLPWL GTSMRLRTCL KSEEGDFVQN ETWEVLFRFD
     ANWVRDEEVE QIVKSCWDLH DESIHGKLQR VGQNLLSWSR SNKRSYTERK QYCRLGCVSC
     QQLILNMEAD KEELFWEQRA RANWLRHGDM STSFFHNYAT YRRKNNTIVG LFDTYDTWIM
     DPIELISVAD SYFKELFQSS NLGVVSPIFN EIEPRVTDEM NESLLLPFRA EEVWQAIKGM
     APLKASGLDM FPTVFYQKYW HVIDDDITSY CLSFLNETTD LEPINNTHIV LIPKVNQPVN
     MTQSRPISLC NVLYKIVAKR LRFAGRWVRL IMKCVRTITY SIGLNEITCS PFRPSCGLRK
     GEPLSLYLFL VCAEGLSALF NAASRDKIIN GATVGWERLR IGHLLFADDI VLFGEDTPMG
     AINMKKLLHV SDTFSRQRIN FDNSLLFFSS NVEEGVKEHI GRVLGVRIST NPERYFGLPT
     MNDPWLHGYG DGKVRPRNID IRYTMVSDHI DASTHAWKYE VLRDLFDDEQ VSSICSIPLS
     KVGMGDVLVW RPDGSGQYIV KSGYRLLQTA QTTGQGGSLD AQAMGVSKFY KEMWVVALPA
     KVKITVWRIV NNFVSTFDNL QQRRLYVNNV CCFYQFSPET IDHLMRDFTN VLPFPVYATP
     GGVDAYIREI GCFAAPIDSA LTRNQAIWQA PGEGMVKFNF DSAYHAQSME AVSGVIGRDS
     TGCVLVSCTV PHTFVKDAFV VEALSCFQAV TFALELGFRR VISEGDSLTV IKKLRCPIVD
     GSFIAPVICE INEISKAFEC VSFSFVGRIA NNVAHLLARE GWMHSEQRFW VEEASPGASV
     AAE
//