ID A0A6A2ZT87_HIBSY Unreviewed; 890 AA.
AC A0A6A2ZT87;
DT 17-JUN-2020, integrated into UniProtKB/TrEMBL.
DT 17-JUN-2020, sequence version 1.
DT 27-MAR-2024, entry version 10.
DE RecName: Full=RNase H type-1 domain-containing protein {ECO:0000259|Pfam:PF13456};
GN ORFNames=F3Y22_tig00110722pilonHSYRG00005
GN {ECO:0000313|EMBL:KAE8695271.1};
OS Hibiscus syriacus (Rose of Sharon).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Hibiscus.
OX NCBI_TaxID=106335 {ECO:0000313|EMBL:KAE8695271.1, ECO:0000313|Proteomes:UP000436088};
RN [1] {ECO:0000313|EMBL:KAE8695271.1, ECO:0000313|Proteomes:UP000436088}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Baekdansim {ECO:0000313|Proteomes:UP000436088};
RC TISSUE=Leaf {ECO:0000313|EMBL:KAE8695271.1};
RA Kim Y.-M.;
RT "Draft genome information of white flower Hibiscus syriacus.";
RL Submitted (SEP-2019) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KAE8695271.1}.
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DR EMBL; VEPZ02001089; KAE8695271.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A6A2ZT87; -.
DR Proteomes; UP000436088; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0004523; F:RNA-DNA hybrid ribonuclease activity; IEA:InterPro.
DR CDD; cd06222; RNase_H_like; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR044730; RNase_H-like_dom_plant.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR002156; RNaseH_domain.
DR InterPro; IPR036397; RNaseH_sf.
DR PANTHER; PTHR46890; NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED; 1.
DR PANTHER; PTHR46890:SF45; RNA BINDING _ RNA-DIRECTED DNA POLYMERASE; 1.
DR Pfam; PF13456; RVT_3; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000436088};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 176..196
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 273..296
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 762..861
FT /note="RNase H type-1"
FT /evidence="ECO:0000259|Pfam:PF13456"
FT REGION 107..131
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 890 AA; 99551 MW; 8DE2C8B0455BFC04 CRC64;
MDRPLPPIVG YSFVRCYALF FRNPRRLAGP GSSVGPSLVV VLLCLDLFGP ILTPISWVRQ
IRTQCVDVSL SNTGLILLTV SLLGKQHCLG SRVLNEVSLS ALFKRKTSSS STPHTNIRKF
KSQRRLATPS SPTLDPAVIA NDPQAIFLIE TKLHESRLSD RPLCTLSVTP LDCRGFSWRI
GSILTIHLGP ILAIILSLTH RYGRECCYPL ALYWFLWQPV TGNRDQSWSL LRHLSCMNTL
PWLCAGVGRI GHTFENVWTG QWVLSPDKPP QMLLFPIFLH WCLIIVLFCQ SVLVGITPCI
TTSQNTTLTM PFTSNEVKIA VFQLPPLKAP GPNGFHASFY RTFSDTVGDD LTHFCLGVLN
GHADVSFVNE ATIVLIPKSV FIPERLIIDT SLLAAETLHT YWTHRSGRQG LFALKLDMSK
TYDRVGWCFL EQVLLRFGFH TQWVSLLMSY VQSVRYRVRV NGKLSEFDSM WSFFSSPFVP
DDCLVFGRAN HADVAKLRSI VRRFEECSDR LISWGKAEHY IPIAEGIDVV PHKSVNGPQL
VEGRKTNSYQ SCTAVPSNLP DEPLQTANPA LSVIKAKYYP VGGFFTSELG AQPSYAWRSI
WSVKGILAEG LRAQLGDGTT IPIFTLHWVP HCSPTDLLQS CVNTGHLACV SDLIDQNLVR
STYNYLLQLD HHRASTATQD RSFYKLLWAQ PLLEKDPNYL RCGQAQESIL HAFIACNHLQ
STWELQEWIF HAFFLLLWSI WVALNRHLHQ GSVVSDVETM VNFDGSFNRE IGRGGVGCVI
RNFDGKFLAA CSRSIIYAMD AFHVESLGCL EGMHLAISLG HLRVVVKGNS RSVISGASTS
SNNDSYGVLF WIAFELFPSI WMFAASNMLA VPATPLPMHL RVKVSPLALL
//
