ID A0A6A3FPV1_9STRA Unreviewed; 1404 AA.
AC A0A6A3FPV1;
DT 17-JUN-2020, integrated into UniProtKB/TrEMBL.
DT 17-JUN-2020, sequence version 1.
DT 27-MAR-2024, entry version 11.
DE RecName: Full=Reverse transcriptase domain-containing protein {ECO:0000259|PROSITE:PS50878};
GN ORFNames=PF001_g3430 {ECO:0000313|EMBL:KAE9324408.1}, PF002_g4387
GN {ECO:0000313|EMBL:KAE9251217.1}, PF004_g3219
GN {ECO:0000313|EMBL:KAE9249829.1}, PF005_g3796
GN {ECO:0000313|EMBL:KAE9229609.1}, PF006_g3244
GN {ECO:0000313|EMBL:KAE9152543.1}, PF007_g3707
GN {ECO:0000313|EMBL:KAE9132469.1}, PF009_g3953
GN {ECO:0000313|EMBL:KAE8946421.1}, PF010_g3395
GN {ECO:0000313|EMBL:KAE9131830.1}, PF011_g3035
GN {ECO:0000313|EMBL:KAE9025425.1};
OS Phytophthora fragariae.
OC Eukaryota; Sar; Stramenopiles; Oomycota; Peronosporales; Peronosporaceae;
OC Phytophthora.
OX NCBI_TaxID=53985 {ECO:0000313|EMBL:KAE8946421.1, ECO:0000313|Proteomes:UP000429523};
RN [1] {ECO:0000313|Proteomes:UP000429523, ECO:0000313|Proteomes:UP000433483}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=A4 {ECO:0000313|EMBL:KAE9324408.1,
RC ECO:0000313|Proteomes:UP000437068}, BC-1
RC {ECO:0000313|EMBL:KAE9251217.1, ECO:0000313|Proteomes:UP000440367},
RC BC-23 {ECO:0000313|EMBL:KAE9249829.1,
RC ECO:0000313|Proteomes:UP000476176}, NOV-27
RC {ECO:0000313|EMBL:KAE9229609.1, ECO:0000313|Proteomes:UP000433483},
RC NOV-5 {ECO:0000313|EMBL:KAE9152543.1,
RC ECO:0000313|Proteomes:UP000440732}, NOV-71
RC {ECO:0000313|EMBL:KAE9132469.1, ECO:0000313|Proteomes:UP000441208},
RC NOV-9 {ECO:0000313|EMBL:KAE8946421.1,
RC ECO:0000313|Proteomes:UP000429523}, ONT-3
RC {ECO:0000313|EMBL:KAE9131830.1, ECO:0000313|Proteomes:UP000488956},
RC and SCRP245 {ECO:0000313|EMBL:KAE9025425.1,
RC ECO:0000313|Proteomes:UP000460718};
RA Adams T.M., Armitage A.D., Sobczyk M.K., Bates H.J., Dunwell J.M.,
RA Nellist C.F., Harrison R.J.;
RT "Genomic investigation of the strawberry pathogen Phytophthora fragariae
RT indicates pathogenicity is determined by transcriptional variation in three
RT key races.";
RL Submitted (AUG-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KAE8946421.1}.
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DR EMBL; QXGF01000118; KAE8946421.1; -; Genomic_DNA.
DR EMBL; QXFW01000097; KAE9025425.1; -; Genomic_DNA.
DR EMBL; QXFX01000105; KAE9131830.1; -; Genomic_DNA.
DR EMBL; QXFZ01000113; KAE9132469.1; -; Genomic_DNA.
DR EMBL; QXGA01000101; KAE9152543.1; -; Genomic_DNA.
DR EMBL; QXGB01000116; KAE9229609.1; -; Genomic_DNA.
DR EMBL; QXGC01000099; KAE9249829.1; -; Genomic_DNA.
DR EMBL; QXGD01000136; KAE9251217.1; -; Genomic_DNA.
DR EMBL; QXGE01000108; KAE9324408.1; -; Genomic_DNA.
DR Proteomes; UP000429523; Unassembled WGS sequence.
DR Proteomes; UP000433483; Unassembled WGS sequence.
DR Proteomes; UP000437068; Unassembled WGS sequence.
DR Proteomes; UP000440367; Unassembled WGS sequence.
DR Proteomes; UP000440732; Unassembled WGS sequence.
DR Proteomes; UP000441208; Unassembled WGS sequence.
DR Proteomes; UP000460718; Unassembled WGS sequence.
DR Proteomes; UP000476176; Unassembled WGS sequence.
DR Proteomes; UP000488956; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0004523; F:RNA-DNA hybrid ribonuclease activity; IEA:InterPro.
DR CDD; cd01650; RT_nLTR_like; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR002156; RNaseH_domain.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR000477; RT_dom.
DR PANTHER; PTHR19446:SF415; REVERSE TRANSCRIPTASE-RELATED PROTEIN; 1.
DR PANTHER; PTHR19446; REVERSE TRANSCRIPTASES; 1.
DR Pfam; PF00078; RVT_1; 1.
DR Pfam; PF13456; RVT_3; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR PROSITE; PS50878; RT_POL; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000433483}.
FT DOMAIN 266..545
FT /note="Reverse transcriptase"
FT /evidence="ECO:0000259|PROSITE:PS50878"
SQ SEQUENCE 1404 AA; 156191 MW; 31D7CD891C954A3F CRC64;
MAQTAVREAV KEVLEGFASR LPQEGELDAA TSAIDWDLLK IRIRKKILTV IKQRRRTARA
SFKQKLKRLL RQERRLLELA AGQAISVDMV TDMMDVLTLD DRTGESPLQR VRGAITDCIR
GRAAAKQRQL FRSGGYYVGK TSRQFFSRIS TKYADNEIHR LDAATGQPAR GVHDKADTLA
DAWTPVFQQP SSLVSDRGKV LQWLGPSGQY DSELHDLMAP FSEAEVAAAI GACHAGKACG
PDRLGNDWYR DFCTILTPIL TRLFNCWYST GRFPTSFLEA DIFCIAKGGD SQDPLNYRPL
ALLDTDYKIL TRIITTRASR KLHLMIHPNQ NGFVPFRTIH STLDLYTAAQ AVAQTDPEYA
EALALLLDFS KAYDSVDREF LYAVLLWLGF PSPFVEAMRG LHEDTKVRFL ANGYHSRWVT
VTCGIRQGCP LAPLLFLLVL EALYRRIDNA PEVSGIVLRS RAGMVRLKVG GYADDTATYV
KTPTEVTMII MITRLFAYAS GLRLNEGKTL VIALNPSTVA NTEALPSPLR LQAPDKLARY
LGLQVGSKPD MLYTWQLART QLTARLAIAA SKTTTVDQRS TIVMAIVLPK LLYIGRHQWP
DLKTVGAFQK MIHNFIWHAR FTDERVGGRA WLNEHIAMLP RQLGGIAVPD LKTELIALAA
VTVNMWALDA SPEAQIVEDV LTNSTGNPEA SMVYISPHQV TPPKKGQRLG ASLRTTGVHT
CNVYGGVVMV AGKAAMVQAL NSVRYFKGRI TLTWRGRRMR MDTSSRRGTL WRAAIREEEK
AHGTFCLEWL PFLVLSELKV YSEGGHMVNP KHRFRLLCTG GKQLKDHVHW KWTSNGDLLT
TALATKVTPA VQRQIGSLMR LLVLNYPQLL YPGDHTGQVR YSTEAVGHVP ILRRVTAGRA
LVGLAATEEQ EAEAQVMQSH RCLVENMHTA AGTATTLTAV HPHPRLSRIV CLWVGKRRWA
TSRRVYRRFL THQRTKKCIG MSTVKAERWR TSSPHIAHGL ADITWRRIRR VIGLNPWGEQ
LLLRIKHHAI SVYNPVSEGL SCPHASCSRT TRTDLTHVFW TCPAAQVLRG VLLKRWQSAG
LRLIDTEHAI FSLTLPGIPA EIISVTGRVL AECSEETLTA LGNTVERLTA ACWSLGAAHY
LHAVWRWRVA HFDTHNDVTQ NYHTAGLITR LRNGHADIMG GIPLTVDDKL RWRLGRAICA
VLGADWTGSP TTAHSGGGCY LLFFAGGDGA QQASGGSGIV IATLDRITGG HKMKYFLGST
HTGANMTPTM AAHIGLLRGL RECLRQGWAP VHAVGDNQVG IRQYKTRTPP RVKRLAGTYW
KARRTADAIG VQSWLSQPRE FNRTAQGLAQ LARTTGAGTE WTEHQGSDHV RRWAAITSHA
LSDATEWSNL HRDQDSSESE RTKV
//
