ID A0A6A3MVS2_9STRA Unreviewed; 1626 AA.
AC A0A6A3MVS2;
DT 17-JUN-2020, integrated into UniProtKB/TrEMBL.
DT 17-JUN-2020, sequence version 1.
DT 27-MAR-2024, entry version 11.
DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KAE9035796.1};
GN ORFNames=PR002_g7388 {ECO:0000313|EMBL:KAE9035796.1}, PR003_g7584
GN {ECO:0000313|EMBL:KAE9346136.1};
OS Phytophthora rubi.
OC Eukaryota; Sar; Stramenopiles; Oomycota; Peronosporales; Peronosporaceae;
OC Phytophthora.
OX NCBI_TaxID=129364 {ECO:0000313|EMBL:KAE9035796.1, ECO:0000313|Proteomes:UP000435112};
RN [1] {ECO:0000313|EMBL:KAE9035796.1, ECO:0000313|Proteomes:UP000435112}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SCRP324 {ECO:0000313|EMBL:KAE9035796.1,
RC ECO:0000313|Proteomes:UP000435112}, and SCRP333
RC {ECO:0000313|EMBL:KAE9346136.1, ECO:0000313|Proteomes:UP000434957};
RA Adams T.M., Armitage A.D., Sobczyk M.K., Bates H.J., Dunwell J.M.,
RA Nellist C.F., Harrison R.J.;
RT "Genomic investigation of the strawberry pathogen Phytophthora fragariae
RT indicates pathogenicity is determined by transcriptional variation in three
RT key races.";
RL Submitted (SEP-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KAE9035796.1}.
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DR EMBL; QXFU01000353; KAE9035796.1; -; Genomic_DNA.
DR EMBL; QXFT01000361; KAE9346136.1; -; Genomic_DNA.
DR Proteomes; UP000434957; Unassembled WGS sequence.
DR Proteomes; UP000435112; Unassembled WGS sequence.
DR GO; GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR CDD; cd18673; PIN_XRN1-2-like; 1.
DR Gene3D; 1.25.40.1050; -; 1.
DR Gene3D; 2.170.260.40; -; 1.
DR Gene3D; 2.30.30.750; -; 1.
DR Gene3D; 3.40.50.12390; -; 2.
DR InterPro; IPR027073; 5_3_exoribonuclease.
DR InterPro; IPR041385; SH3_12.
DR InterPro; IPR040992; XRN1_D1.
DR InterPro; IPR047007; XRN1_D1_sf.
DR InterPro; IPR041106; XRN1_D2_D3.
DR InterPro; IPR041412; Xrn1_helical.
DR InterPro; IPR004859; Xrn1_N.
DR InterPro; IPR047008; XRN1_SH3_sf.
DR PANTHER; PTHR12341:SF41; 5'-3' EXORIBONUCLEASE 1; 1.
DR PANTHER; PTHR12341; 5'->3' EXORIBONUCLEASE; 1.
DR Pfam; PF18129; SH3_12; 1.
DR Pfam; PF18332; XRN1_D1; 1.
DR Pfam; PF18334; XRN1_D2_D3; 2.
DR Pfam; PF17846; XRN_M; 1.
DR Pfam; PF03159; XRN_N; 1.
PE 4: Predicted;
KW Exonuclease {ECO:0000256|ARBA:ARBA00022839};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Reference proteome {ECO:0000313|Proteomes:UP000434957}.
FT DOMAIN 1..239
FT /note="Xrn1 N-terminal"
FT /evidence="ECO:0000259|Pfam:PF03159"
FT DOMAIN 282..644
FT /note="Xrn1 helical"
FT /evidence="ECO:0000259|Pfam:PF17846"
FT DOMAIN 697..895
FT /note="5'-3' exoribonuclease 1 D1"
FT /evidence="ECO:0000259|Pfam:PF18332"
FT DOMAIN 900..1000
FT /note="Exoribonuclease Xrn1 D2/D3"
FT /evidence="ECO:0000259|Pfam:PF18334"
FT DOMAIN 1059..1161
FT /note="Exoribonuclease Xrn1 D2/D3"
FT /evidence="ECO:0000259|Pfam:PF18334"
FT DOMAIN 1210..1273
FT /note="5'-3' exoribonuclease 1 SH3-like"
FT /evidence="ECO:0000259|Pfam:PF18129"
FT REGION 1038..1060
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1277..1354
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1373..1419
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1461..1626
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1041..1060
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1277..1315
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1334..1352
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1396..1419
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1472..1493
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1511..1539
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1626 AA; 178988 MW; E30997427DCD0406 CRC64;
MGIPRFYRYM SERYPLLNQP ISDVSLLPEF DAFYLDMNGI VHNCTHSDAA DDALNSLSLE
AQLHGIFTYL DRLITHIIKP QRLVYIAIDG VAPRAKLNQQ RSRRFRAGLD RQQAMDKERH
MQIKLEDEKN GAKARPAAAK FDSNCITPGT EFLGTLSQHL VYFVRQKMKS DPLWARLEVF
FSGSEVPGEG EHKIVEFIRH RKMADGYEAN MRHCMYGSDA DLMLLGLMTH EPHFTLVRET
VVWGNQHRKV AAKQIEEQQW QLVHLSLFRE YLMMEMRVQP PLDGERMLDD FILLTFLLGN
DFIPHSPTLE ISEDAIPLLL KVYRELLENH KGSYLTLNGK ITNVKLLQEL FQIIGNQEEE
ILINRAMEEK RRSGRRGGRQ QVKQNDVNEV EVQKAIMALR IDDDDDLPPP LIDDEDEDEE
EAERALLEAL DGPEAARLSL EIEKEDREVL MLVGSKSFQD TKWSYYERKY GIKRGNGDAG
NKELEQLKKS YMEALVWCLS YYFQGPQSWS WFYPYHYAPM VSDLTDIEDM ITNVKFDEDP
AIAGPLLPFE QLMSNLPASS ANLVPEPYRF LMMSPLSPIK HFYPETFAID MEGKRNAWEG
VNLLPFIDVA LLKQAIAQYC PDSQLTEAER RRNKLQRRPI RIVRDLNALD TLKSTLPGVV
GFPDVLYCNT RVEDYDLPPI PGGEFKSKMM EGVVLPLAGF PSLYTAPLES TRIASVGLNC
FGMSSRKSSL ILQLPASGKL NDGKDAAADD INPSELLGTT VLANWPNLHE VLVVGISTLS
GEYRLKQSTR KHNNHGHKKN EVVYTPYGSD EKSAWAYYAQ TEVVKLLSGR GIPGSGGIDL
GRTGITTVLH VLPLQGMVSN PLTGAIEKKF GETEAFVPAQ LSVRNRKLLD ARFEESGILP
LDERFPVDSK ALITRGKWLG CTAIVRSQDE GQGTVTVHVN TIDQEPPFGY VIAQKITDKF
FPGYLVAQKL GISASTLGLI TGSVIIKPSG TDIGLNIRYR KELLLPGYCR LVSRDSSSSS
PGDDVNVWRK GDIVKIVGSS GNNEGGDSNS SSSQSRSGSS TAWEYTERAV QVIAGFQKEF
PEVVRNLSRL PFATTYQGKD VFGINDAERV EVKAEAVKQW IEQQRLGASE HSKHIPITSD
YIALNAVRAM EAAGTLRASE RAKVAEEQRR APVEATVNAA DLFRPNPLVN QDLTGHEVSQ
RSSKNQGAPN LGDRVINISA RGVPFGHRGT VVATHVSSRC VEVLFDESFT GGEALYGTTS
LDRGKIVAWN NLLCVSVPPG SKNQNRNSRS KQPQSARHTN GAPQQRTSGG APAISSNSRV
PKKILKANDK TPAAPPGPLV PPPIPSAMPA PPNPEKIQKL IQKWSYDGEV ATQADGKPAT
ATSSKPKPKP KAPKTRTAPS SPTSVASTPA APVAPASTSE QKLAPSVAAL FSAAEAAAPA
PPAPAPAPVD PLMELFPHMY DQSSGAPSLL TPPLPTGAPT PQYMPPAYYG AQPPLPGQQP
QLFLMPDGSY APMYAPPPPG TYAPQQPQAP MPPSEEEYPP LGAAPAAKSE KKAASTTESS
SDTAKPKRHS RGGKGNKSAA TKEDGNTAPS AHGAQKKWKP KQNGDAKSKG PQLLLPSQVM
RQQKPQ
//
