ID   A0A6A4CT54_9STRA        Unreviewed;      1115 AA.
AC   A0A6A4CT54;
DT   17-JUN-2020, integrated into UniProtKB/TrEMBL.
DT   17-JUN-2020, sequence version 1.
DT   27-MAR-2024, entry version 14.
DE   RecName: Full=Integrase catalytic domain-containing protein {ECO:0000259|PROSITE:PS50994};
GN   ORFNames=PR003_g24231 {ECO:0000313|EMBL:KAE9294553.1};
OS   Phytophthora rubi.
OC   Eukaryota; Sar; Stramenopiles; Oomycota; Peronosporales; Peronosporaceae;
OC   Phytophthora.
OX   NCBI_TaxID=129364 {ECO:0000313|EMBL:KAE9294553.1, ECO:0000313|Proteomes:UP000434957};
RN   [1] {ECO:0000313|EMBL:KAE9294553.1, ECO:0000313|Proteomes:UP000434957}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=SCRP333 {ECO:0000313|EMBL:KAE9294553.1,
RC   ECO:0000313|Proteomes:UP000434957};
RA   Adams T.M., Armitage A.D., Sobczyk M.K., Bates H.J., Dunwell J.M.,
RA   Nellist C.F., Harrison R.J.;
RT   "Genomic investigation of the strawberry pathogen Phytophthora fragariae
RT   indicates pathogenicity is determined by transcriptional variation in three
RT   key races.";
RL   Submitted (AUG-2018) to the EMBL/GenBank/DDBJ databases.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:KAE9294553.1}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; QXFT01002685; KAE9294553.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A6A4CT54; -.
DR   Proteomes; UP000434957; Unassembled WGS sequence.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0004523; F:RNA-DNA hybrid ribonuclease activity; IEA:InterPro.
DR   GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR   Gene3D; 1.10.340.70; -; 1.
DR   Gene3D; 3.30.70.270; -; 2.
DR   Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 2.
DR   InterPro; IPR016197; Chromo-like_dom_sf.
DR   InterPro; IPR043502; DNA/RNA_pol_sf.
DR   InterPro; IPR001584; Integrase_cat-core.
DR   InterPro; IPR041588; Integrase_H2C2.
DR   InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR002156; RNaseH_domain.
DR   InterPro; IPR036397; RNaseH_sf.
DR   InterPro; IPR041373; RT_RNaseH.
DR   PANTHER; PTHR37984:SF7; INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN; 1.
DR   PANTHER; PTHR37984; PROTEIN CBG26694; 1.
DR   Pfam; PF17921; Integrase_H2C2; 1.
DR   Pfam; PF17917; RT_RNaseH; 1.
DR   Pfam; PF13456; RVT_3; 1.
DR   SUPFAM; SSF54160; Chromo domain-like; 1.
DR   SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR   SUPFAM; SSF53098; Ribonuclease H-like; 2.
DR   PROSITE; PS50994; INTEGRASE; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000434957}.
FT   DOMAIN          759..919
FT                   /note="Integrase catalytic"
FT                   /evidence="ECO:0000259|PROSITE:PS50994"
FT   REGION          557..579
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1115 AA;  127573 MW;  37EAB6239CAC4BA1 CRC64;
     MPFGLKNAPL VYQAVINNCL WGFVRLPAEE EKLVDQDVLE FLGLDPFERD ESEREKAERN
     VPILTDKITA FKRDIPAPSQ MGPVIGRSSY IDDIAHGAPT WDQLCEDLNT LLFRLRYWNI
     SVSLPKSEFG KLSIPYLSHE ISAEGLRGTP KIAKGVQDLP FPKTLKGVQS FLGSLNYYHK
     FIEDFPVVAA VLYELTDEQV RAGRDLSKAK KAFEILKRKI VSTPLLRHPD RTKPFVIIPH
     ANQWAACAVL GQEYDGVIHP VRFTGRVLND AELRYHVAEK EVVAVMRVLD VFQTLVQNCL
     VNVFTRHPVL SWLLKSKTAD GRCVRWGVIF SHWNLEVHKI QRDEDGLPAI LGAGITPREH
     LDEVAESLIP AKGRVKAPPV ISMEMLEADF AGYVLSIDGA AKTSTRQGSS GCIIWELPGW
     NILAVHGFIL EDVTVNDAEY YGLLKGLTLA SEREIQDLVV VGDSRIVIQQ VQGLINCNQP
     NLQRRLSEVG IPKERFTSMR LVHVKREYNQ AADYLTSKTL ALGTSWQTED PEELKQLVKI
     HEKLMKPLVI VDENTQDVSP QEGLPVETPT GIRPGPESAP LSTAARIMVA VTRSRTQEQP
     EQGEPVGPLE YQAERWRRIK AHQECDDQLM EIKKFLKGDL DSFSRGQIRR ISKQAELYAL
     DVRDVLYRLS RSTKDRPRDM SDELRLVVPE SLRPDLLHYT HEDFHGGHQG ITRTHEKLRS
     EFYWPGMYAD VEAFVKECVD CTSGKGRPPN PGPSPGNIEP RYPFEVVSMD FVTHLPKSER
     GNTFLLLFQD TFSGYVMCQP MDSTTAQDVT EAYEERVFRS FRASSLLRHD QDPRFMSEVF
     TRFRELLGSR QRATLAYRPQ ADGQQERSVQ TVIRSVRAYA AESDQSDWDE HAERLMFALN
     TSYDATRLDT PFYLVHGWDA KGTVSAMLGP RPSSVPERTA YEWRRKFQRD YSYAQACAEH
     LQKKAKRARS DEQTQKWKEL SDRLKSGFHV GDAVWLYIPK VQTGLSRKFA PLWHGPFRIA
     EMHDDFRVKL KIEDTGYRVN PWVHVSRLKP RALHPKRPSV QIDVDDEDDF DTALLPEDSW
     EADNDNDEYE VEKILDLRWS KRTRTYKRAR EYLIK
//