ID A0A6A4VFV4_AMPAM Unreviewed; 809 AA.
AC A0A6A4VFV4;
DT 17-JUN-2020, integrated into UniProtKB/TrEMBL.
DT 17-JUN-2020, sequence version 1.
DT 24-JAN-2024, entry version 10.
DE SubName: Full=Intraflagellar transport protein 88 {ECO:0000313|EMBL:KAF0290444.1};
GN Name=Ift88_1 {ECO:0000313|EMBL:KAF0290444.1};
GN ORFNames=FJT64_011368 {ECO:0000313|EMBL:KAF0290444.1};
OS Amphibalanus amphitrite (Striped barnacle) (Balanus amphitrite).
OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea;
OC Cirripedia; Thoracica; Thoracicalcarea; Balanomorpha; Balanoidea;
OC Balanidae; Amphibalaninae; Amphibalanus.
OX NCBI_TaxID=1232801 {ECO:0000313|EMBL:KAF0290444.1, ECO:0000313|Proteomes:UP000440578};
RN [1] {ECO:0000313|EMBL:KAF0290444.1, ECO:0000313|Proteomes:UP000440578}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SNU_AA5 {ECO:0000313|EMBL:KAF0290444.1};
RC TISSUE=Soma without cirri and trophi {ECO:0000313|EMBL:KAF0290444.1};
RA Kim W.;
RT "Draft genome assembly of a fouling barnacle, Amphibalanus amphitrite
RT (Darwin, 1854): The first reference genome for Thecostraca.";
RL Submitted (JUL-2019) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KAF0290444.1}.
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DR EMBL; VIIS01001956; KAF0290444.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A6A4VFV4; -.
DR Proteomes; UP000440578; Unassembled WGS sequence.
DR GO; GO:0031514; C:motile cilium; IEA:UniProtKB-KW.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 2.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR019734; TPR_repeat.
DR PANTHER; PTHR44117; INTRAFLAGELLAR TRANSPORT PROTEIN 88 HOMOLOG; 1.
DR PANTHER; PTHR44117:SF1; INTRAFLAGELLAR TRANSPORT PROTEIN 88 HOMOLOG; 1.
DR Pfam; PF13424; TPR_12; 1.
DR Pfam; PF13432; TPR_16; 1.
DR Pfam; PF13174; TPR_6; 1.
DR Pfam; PF13181; TPR_8; 1.
DR SMART; SM00028; TPR; 9.
DR SUPFAM; SSF81901; HCP-like; 1.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS50005; TPR; 2.
PE 4: Predicted;
KW Cell projection {ECO:0000313|EMBL:KAF0290444.1};
KW Cilium {ECO:0000313|EMBL:KAF0290444.1};
KW Flagellum {ECO:0000313|EMBL:KAF0290444.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000440578};
KW TPR repeat {ECO:0000256|PROSITE-ProRule:PRU00339}.
FT REPEAT 220..253
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 546..579
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REGION 1..121
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 712..809
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..18
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 19..45
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 731..745
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 772..795
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 809 AA; 90822 MW; C25A481CA2B2DDD2 CRC64;
MADEEDLYEF DASIDQSEME NDADFQQALK TSTGKRPTTT ARLATGMAGN RPGTQARAGL
RTGAPPGTAG VRGMTAAART SSTGDSRPMT AVKGAGYSSG AGTPGLESTK PVLETQKPET
PEEKIRQLEV MTMDLIEESC LASCRNEGKL ALDKAKEAST KERTLIRQRD QAGLSEQHNM
ELTFVVLTNL ASQYAKNELY TEALNTYNVI TKNKSFNNPG RLKVNMGNIY YKMEEYPKAL
KFYRMALDQV PSGQNSTKIK IMHNIGILFV KMGRYKDAIT SFEYCMHEKA SFRTGLHLVV
CYQALGERQK QRDAFEKLLQ VPFDMDKEDH YKDLEEEAEK DPQTALVVEV IKNDPMRKQE
RRLRNEAEQC ILTASKLIST TGDTPAEVSE SYDWCLETLK NSQHADLASD LEINKAIMYL
RRKDFKAAID TLRVFDKVET KVASHAFTNL AFLYFLRKEF EEAERYAVQA RDADGYNAPA
LVNLGNCCLQ RGDLQKAKEY YICALDNDAS CVQALYNLGL VDKQLRLYAD AKASFEKLHL
IVRSHPQIIY QIASCYELLG DVDQATEWYV QMLSLVPTDP DTLFHLGGLF DREGDKQGAY
QYFFDSSRFY PSNLEVIDWL GSYFIEHQVS EKAIMFFERA ALIQPAEVKW LLMVASCYRR
AGNYQRALAK YKEIHMKFPD NVECLKFLVR ICTDLGLKEA ADYSIELKKA EKSKEMRDER
MKGKPGTSYR GSSGRGGSDS SLGGSRPGSA AAPAPAAAAA AADGPTPQQQ EEIDARYKDP
LGPMKQRMAK DGKNEDDWDD DLDDDMLPE
//
