ID A0A6D2IIY9_9BRAS Unreviewed; 988 AA.
AC A0A6D2IIY9;
DT 17-JUN-2020, integrated into UniProtKB/TrEMBL.
DT 17-JUN-2020, sequence version 1.
DT 27-MAR-2024, entry version 13.
DE RecName: Full=BED-type domain-containing protein {ECO:0000259|PROSITE:PS50808};
GN ORFNames=MERR_LOCUS17460 {ECO:0000313|EMBL:CAA7030225.1};
OS Microthlaspi erraticum.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Coluteocarpeae; Microthlaspi.
OX NCBI_TaxID=1685480 {ECO:0000313|EMBL:CAA7030225.1, ECO:0000313|Proteomes:UP000467841};
RN [1] {ECO:0000313|EMBL:CAA7030225.1, ECO:0000313|Proteomes:UP000467841}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA Mishra B.;
RL Submitted (JAN-2020) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the eukaryotic ribosomal protein eL27 family.
CC {ECO:0000256|ARBA:ARBA00009124}.
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DR EMBL; CACVBM020001092; CAA7030225.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A6D2IIY9; -.
DR Proteomes; UP000467841; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR CDD; cd06090; KOW_RPL27; 1.
DR Gene3D; 2.30.30.770; -; 1.
DR InterPro; IPR007021; DUF659.
DR InterPro; IPR008906; HATC_C_dom.
DR InterPro; IPR001141; Ribosomal_eL27.
DR InterPro; IPR041991; Ribosomal_eL27_KOW.
DR InterPro; IPR038655; Ribosomal_eL27_sf.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR008991; Translation_prot_SH3-like_sf.
DR InterPro; IPR003656; Znf_BED.
DR PANTHER; PTHR32166:SF121; HAT TRANSPOSON SUPERFAMILY; 1.
DR PANTHER; PTHR32166; OSJNBA0013A04.12 PROTEIN; 1.
DR Pfam; PF05699; Dimer_Tnp_hAT; 1.
DR Pfam; PF04937; DUF659; 1.
DR Pfam; PF01777; Ribosomal_L27e; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR SUPFAM; SSF50104; Translation proteins SH3-like domain; 1.
DR PROSITE; PS50808; ZF_BED; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000467841};
KW Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274};
KW Ribosomal protein {ECO:0000256|ARBA:ARBA00022980};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00027}.
FT DOMAIN 216..274
FT /note="BED-type"
FT /evidence="ECO:0000259|PROSITE:PS50808"
FT REGION 287..308
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 322..361
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 100..127
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 336..361
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 988 AA; 111890 MW; 77C321C4964E071C CRC64;
MVKFLKQNKA VILLQGRYAG KKAVIIKSFD DGSRDRPYGH CLVAGLKKYP SKVIRKDSAK
KTAKKSRVKC FIKLVNYQHL MPTRYTLDVD LKDVATIDAL QSKDKKVAAL KEAKAKLEER
FKTGKNRWFF TKLRKISQTL HFSVALRFLS SVSPTPLLRL IPPSSSPEPN SLYRNFNQVL
FRTDPTPRNQ PGHNLQTKKA SLRMDSDLEP VALTPQKQDS AWKHCLVYKY GDRVQMRCLY
CRKMFKGGGI TRVKEHLAGK KGQGTICDQV PEEVRLFLQQ CIDGTVRRQR KRRKSSPEPL
PIAYFPPGDE LETTTTTQIV PAGPSDADDN GFKSPELVAG QSSGRTKQRT YRSRKNSNNN
AAFDRSDLAN VEVGDGDLME NLIPVAISSV KNIVHPSSKE REKTVHMAIG RFLFDIGADF
DAVSSVNFQP LFDAIVSGGF GVSIPNHEDL RGWVLKSCVE EMKNEIDECK LLWKKTGCSV
LVQELSSNEA TKVLNFFVYS PEKVVFLKSV DASEILASSS DGDVDDDDKL YELLKEVVEE
VGETSVVQVI TKCEDHYVSA GKKLMDVYRS LYWVPCAAHC LEKMLEEFGK IDWISDIIEQ
ARTVTRIIYN HSDVLNLMRR FTFGNDIVLP GFTVSATNFA TMARFADLKP HLQSMVTSSE
WNECPYSKEA GGLAMAETIS DESFWKALTL ANNITVPLLR VLKIVCSEKR PAMGYVYAGL
YRAKEAIKTH LVHREDYIIY WKIIDKWWLQ QHRLPLHAAG FYLNPKFFYS IDEEMRSEIH
LAVVDCIEKL VPDVNVQDVI VKDINSYKNA GGIFGRNLAI RARDTMLPAE WWSTYGESCL
NLSRFAIRIL SQTCSSLVGS GRNLTPVKQV YETKNSIERQ RLSDLVFVQY NMRLRRLGVE
SGDEIVDPLS YSNMEVLEDW VSRNQVCIEG NGSSDWKSLE PVKRTEEIAV IDETEDLGSG
FDDAEIFKGE KEVSDEGYYT NISEKLFT
//
