ID A0A6D2KGJ6_9BRAS Unreviewed; 693 AA.
AC A0A6D2KGJ6;
DT 17-JUN-2020, integrated into UniProtKB/TrEMBL.
DT 17-JUN-2020, sequence version 1.
DT 27-MAR-2024, entry version 14.
DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CAA7047253.1};
GN ORFNames=MERR_LOCUS34488 {ECO:0000313|EMBL:CAA7047253.1};
OS Microthlaspi erraticum.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Coluteocarpeae; Microthlaspi.
OX NCBI_TaxID=1685480 {ECO:0000313|EMBL:CAA7047253.1, ECO:0000313|Proteomes:UP000467841};
RN [1] {ECO:0000313|EMBL:CAA7047253.1, ECO:0000313|Proteomes:UP000467841}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA Mishra B.;
RL Submitted (JAN-2020) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CACVBM020001370; CAA7047253.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A6D2KGJ6; -.
DR Proteomes; UP000467841; Unassembled WGS sequence.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0004523; F:RNA-DNA hybrid ribonuclease activity; IEA:InterPro.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR CDD; cd09279; RNase_HI_like; 1.
DR CDD; cd01647; RT_LTR; 1.
DR Gene3D; 1.10.340.70; -; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 3.10.10.10; HIV Type 1 Reverse Transcriptase, subunit A, domain 1; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 2.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR001584; Integrase_cat-core.
DR InterPro; IPR041588; Integrase_H2C2.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR002156; RNaseH_domain.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR000477; RT_dom.
DR InterPro; IPR041577; RT_RNaseH_2.
DR PANTHER; PTHR37984:SF7; INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR37984; PROTEIN CBG26694; 1.
DR Pfam; PF17921; Integrase_H2C2; 1.
DR Pfam; PF17919; RT_RNaseH_2; 1.
DR Pfam; PF00665; rve; 1.
DR Pfam; PF00078; RVT_1; 1.
DR Pfam; PF13456; RVT_3; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 2.
DR PROSITE; PS50994; INTEGRASE; 1.
DR PROSITE; PS50879; RNASE_H_1; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000467841}.
FT DOMAIN 232..361
FT /note="RNase H type-1"
FT /evidence="ECO:0000259|PROSITE:PS50879"
FT DOMAIN 534..693
FT /note="Integrase catalytic"
FT /evidence="ECO:0000259|PROSITE:PS50994"
FT REGION 674..693
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 693 AA; 78198 MW; 87188D17BF1E8AF7 CRC64;
MDAFSGYNQI FMHPDDREKT AFITDRGTYC YKVMPFGLKN AGATYQRLVN KMFADQLGRS
MEVYIDDMLV KSAKARSRQA PQRMFPNLRE GKPEADLGDP RPPIADILQR NPKTHRTYRR
IEQIHLALNR QVSPLLPIAS IKQEVRVGQK CEDAFKQLKE YLTTPPILAK PEEGETLLLY
IAISSTAVSG VLVREDRGEQ QPVFYPDERQ VTSLADFIVE IPPELATQED EQILKWTLHV
DGSSSRQGAG VGIRLVSPTG EILEQSIKLG FPASNNEAEY EAIIAGLRLA EAVGAEHVRA
FCDSQLVAKQ FSGDYDTKDD RMDAYLKQTQ RLAKAFKTFE LTKIPRSENS EADALAALAS
KTESALRRVI PVETIDEPSI KLPKGTVVMA ISQEEEEDEN LTDDESAEHK SWQDEIRNYL
INDAVPEERW AARRLRRKAA YYFLRNNELF RWSANKVILR CCDEAQAKSI MVETHEGASG
NHAGGRSLAL KIKKIGYFWP TMIGDCINVA AKCVPCQRYA PAINAPTQAL QAAIPAYPFM
RWGMDIVGPM PRSRQCAYLL VVTDYFTKWV EAKAYKNPTA HDVRNFVWQY IICRHGLPYE
IVTDNGGQFV AATFREFCAS WNIKITYSTP RYPQANGQAE STNKTIVDGL KKRLEGYQGA
WADELDGVLW SHRTTPEPHP GKPHSLCRTV AKH
//
