ID A0A6G0I9F1_LARCR Unreviewed; 638 AA.
AC A0A6G0I9F1;
DT 12-AUG-2020, integrated into UniProtKB/TrEMBL.
DT 12-AUG-2020, sequence version 1.
DT 24-JAN-2024, entry version 8.
DE RecName: Full=Transcription initiation factor TFIID subunit 6 {ECO:0000256|ARBA:ARBA00040091};
GN ORFNames=D5F01_LYC14220 {ECO:0000313|EMBL:KAE8288158.1};
OS Larimichthys crocea (Large yellow croaker) (Pseudosciaena crocea).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC Eupercaria; Sciaenidae; Larimichthys.
OX NCBI_TaxID=215358 {ECO:0000313|EMBL:KAE8288158.1, ECO:0000313|Proteomes:UP000424527};
RN [1] {ECO:0000313|EMBL:KAE8288158.1, ECO:0000313|Proteomes:UP000424527}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JMULYC20181020 {ECO:0000313|EMBL:KAE8288158.1};
RC TISSUE=Muscle {ECO:0000313|EMBL:KAE8288158.1};
RA Xiao S.;
RT "Chromosome genome assembly for large yellow croaker.";
RL Submitted (JUL-2019) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the TAF6 family.
CC {ECO:0000256|ARBA:ARBA00007688}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KAE8288158.1}.
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DR EMBL; REGW02000013; KAE8288158.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A6G0I9F1; -.
DR Proteomes; UP000424527; Unassembled WGS sequence.
DR GO; GO:0000124; C:SAGA complex; IEA:InterPro.
DR GO; GO:0046695; C:SLIK (SAGA-like) complex; IEA:InterPro.
DR GO; GO:0005669; C:transcription factor TFIID complex; IEA:InterPro.
DR GO; GO:0046982; F:protein heterodimerization activity; IEA:InterPro.
DR GO; GO:0016251; F:RNA polymerase II general transcription initiation factor activity; IEA:InterPro.
DR GO; GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
DR GO; GO:0006367; P:transcription initiation at RNA polymerase II promoter; IEA:InterPro.
DR CDD; cd08050; TAF6C; 1.
DR Gene3D; 1.10.20.10; Histone, subunit A; 1.
DR Gene3D; 1.25.40.770; TAF6, C-terminal HEAT repeat domain; 1.
DR InterPro; IPR009072; Histone-fold.
DR InterPro; IPR037796; TAF6.
DR InterPro; IPR011442; TAF6_C.
DR InterPro; IPR046344; TAF6_C_sf.
DR InterPro; IPR004823; TAF_TATA-bd_Histone-like_dom.
DR PANTHER; PTHR10221; TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6; 1.
DR PANTHER; PTHR10221:SF9; TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6; 1.
DR Pfam; PF02969; TAF; 1.
DR Pfam; PF07571; TAF6_C; 1.
DR SMART; SM00803; TAF; 1.
DR SUPFAM; SSF47113; Histone-fold; 1.
PE 3: Inferred from homology;
KW Initiation factor {ECO:0000313|EMBL:KAE8288158.1};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Protein biosynthesis {ECO:0000313|EMBL:KAE8288158.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000424527};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 12..78
FT /note="TATA box binding protein associated factor (TAF)
FT histone-like fold"
FT /evidence="ECO:0000259|SMART:SM00803"
FT REGION 144..199
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 507..526
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 619..638
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 638 AA; 69266 MW; 9BCC1FC0A6D57606 CRC64;
MAEERRPKQC SVVLPTESMK AMAESMGVGQ LQEESCVALS EEVSYRIKEI AQDALKFMHH
GKRRKLTTSD IDNALKLKNV EPLFGFQSQE FIPFRFASGG GRELHFYEEK EVDLSDIINT
PLPRVPLDVS LKAHWLSIDG VQPAIPENPP PAPKEQQKIE STEPLKVVKP GQEEDGAIQG
KGQGATAADG KGKEKGPIKL KPRSTHELSV EQQLYYKEIT EACVGSCEAK RAEALQSIAT
DPGLYQMLPR FSTFISEGVR VNVVQNNLAL LIYLMRMVKA LMDNPTLYLE KYLHELIPAV
VTCIVSKQLC LRPDVDNHWA LRDFAARLMA QSCKTFSTTT NNIQSRITKT FTKSWLDDKT
QWTTRYGCIA GLAELGADVI KTLILPRLSV EGARIKAVME GPVVSNIDKI GADHVQSLLL
KHCASVIAKI RPQPDNVEQY RTDYGYLGPM LCSHVMKART QAALQAQQVN RTTLTITQPR
PTLTVSQSGL SGSAGPRTPS IIKVPSSLTL MSPRPGTPSQ PSPPATKYIV MATSAGAAST
QQVITISSSQ SASPVTSTVP SATSTLQPLV KLESGGGPGL TTSRPLQKYI VVSLPSSASS
SLESKSSVLP TSISSNPLEA AMKLDRSESP GASTQSPH
//