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Database: UniProt
Entry: A0A6G1C4N2_9ORYZ
LinkDB: A0A6G1C4N2_9ORYZ
Original site: A0A6G1C4N2_9ORYZ 
ID   A0A6G1C4N2_9ORYZ        Unreviewed;       132 AA.
AC   A0A6G1C4N2;
DT   12-AUG-2020, integrated into UniProtKB/TrEMBL.
DT   12-AUG-2020, sequence version 1.
DT   24-JAN-2024, entry version 11.
DE   RecName: Full=Small nuclear ribonucleoprotein Sm D3 {ECO:0000256|RuleBase:RU365050};
DE            Short=Sm-D3 {ECO:0000256|RuleBase:RU365050};
DE   AltName: Full=snRNP core protein D3 {ECO:0000256|RuleBase:RU365050};
GN   ORFNames=E2562_012436 {ECO:0000313|EMBL:KAF0895428.1};
OS   Oryza meyeriana var. granulata.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza meyeriana.
OX   NCBI_TaxID=110450 {ECO:0000313|EMBL:KAF0895428.1, ECO:0000313|Proteomes:UP000479710};
RN   [1] {ECO:0000313|EMBL:KAF0895428.1, ECO:0000313|Proteomes:UP000479710}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Menghai {ECO:0000313|Proteomes:UP000479710};
RC   TISSUE=Leaf {ECO:0000313|EMBL:KAF0895428.1};
RA   Li W.;
RT   "Whole genome sequence of Oryza granulata.";
RL   Submitted (NOV-2019) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Core component of the spliceosomal U1, U2, U4 and U5 small
CC       nuclear ribonucleoproteins (snRNPs), the building blocks of the
CC       spliceosome. {ECO:0000256|RuleBase:RU365050}.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm, cytosol
CC       {ECO:0000256|RuleBase:RU365050}. Nucleus
CC       {ECO:0000256|RuleBase:RU365050}. Note=SMN-mediated assembly into core
CC       snRNPs occurs in the cytosol before SMN-mediated transport to the
CC       nucleus to be included in spliceosomes.
CC       {ECO:0000256|RuleBase:RU365050}.
CC   -!- SIMILARITY: Belongs to the snRNP core protein family.
CC       {ECO:0000256|ARBA:ARBA00008146, ECO:0000256|RuleBase:RU365050}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:KAF0895428.1}.
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DR   EMBL; SPHZ02000010; KAF0895428.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A6G1C4N2; -.
DR   Proteomes; UP000479710; Unassembled WGS sequence.
DR   GO; GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.
DR   GO; GO:0005681; C:spliceosomal complex; IEA:InterPro.
DR   GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR   GO; GO:0000387; P:spliceosomal snRNP assembly; IEA:UniProtKB-UniRule.
DR   CDD; cd01721; Sm_D3; 1.
DR   Gene3D; 2.30.30.100; -; 1.
DR   InterPro; IPR027141; LSm4/Sm_D1/D3.
DR   InterPro; IPR010920; LSM_dom_sf.
DR   InterPro; IPR047575; Sm.
DR   InterPro; IPR001163; Sm_dom_euk/arc.
DR   InterPro; IPR034099; SmD3.
DR   PANTHER; PTHR23338; SMALL NUCLEAR RIBONUCLEOPROTEIN SM; 1.
DR   PANTHER; PTHR23338:SF17; SMALL NUCLEAR RIBONUCLEOPROTEIN SM D3; 1.
DR   Pfam; PF01423; LSM; 1.
DR   SMART; SM00651; Sm; 1.
DR   SUPFAM; SSF50182; Sm-like ribonucleoproteins; 1.
DR   PROSITE; PS52002; SM; 1.
PE   3: Inferred from homology;
KW   Cytoplasm {ECO:0000256|RuleBase:RU365050};
KW   mRNA processing {ECO:0000256|RuleBase:RU365050};
KW   mRNA splicing {ECO:0000256|RuleBase:RU365050};
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|RuleBase:RU365050};
KW   Reference proteome {ECO:0000313|Proteomes:UP000479710};
KW   Ribonucleoprotein {ECO:0000256|RuleBase:RU365050}.
FT   DOMAIN          7..79
FT                   /note="Sm"
FT                   /evidence="ECO:0000259|PROSITE:PS52002"
FT   REGION          112..132
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   132 AA;  14295 MW;  0A75857EAB0BC898 CRC64;
     MSRSLGIPVK LLHEAAGHVV TVELKTGEVY RGSMVECEDN WNCQLDNITF TAKDGKISQL
     EHVFIRGSRV RFMIIPDMLK NAPMFKRLEA RIRGKGSAIG VGRGRAVAMR ARAAAGRGGG
     PVGRGGAPPV RR
//
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