ID A0C2P6_PARTE Unreviewed; 144 AA.
AC A0C2P6;
DT 28-NOV-2006, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2006, sequence version 1.
DT 27-MAR-2024, entry version 63.
DE SubName: Full=Chromosome undetermined scaffold_145, whole genome shotgun sequence {ECO:0000313|EMBL:CAK65063.1};
GN ORFNames=GSPATT00034541001 {ECO:0000313|EMBL:CAK65063.1};
OS Paramecium tetraurelia.
OC Eukaryota; Sar; Alveolata; Ciliophora; Intramacronucleata;
OC Oligohymenophorea; Peniculida; Parameciidae; Paramecium.
OX NCBI_TaxID=5888 {ECO:0000313|EMBL:CAK65063.1, ECO:0000313|Proteomes:UP000000600};
RN [1] {ECO:0000313|EMBL:CAK65063.1, ECO:0000313|Proteomes:UP000000600}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Stock d4-2 {ECO:0000313|EMBL:CAK65063.1,
RC ECO:0000313|Proteomes:UP000000600};
RX PubMed=17086204; DOI=10.1038/nature05230;
RG Genoscope;
RA Aury J.-M., Jaillon O., Duret L., Noel B., Jubin C., Porcel B.M.,
RA Segurens B., Daubin V., Anthouard V., Aiach N., Arnaiz O., Billaut A.,
RA Beisson J., Blanc I., Bouhouche K., Camara F., Duharcourt S., Guigo R.,
RA Gogendeau D., Katinka M., Keller A.-M., Kissmehl R., Klotz C., Koll F.,
RA Le Moue A., Lepere C., Malinsky S., Nowacki M., Nowak J.K., Plattner H.,
RA Poulain J., Ruiz F., Serrano V., Zagulski M., Dessen P., Betermier M.,
RA Weissenbach J., Scarpelli C., Schachter V., Sperling L., Meyer E.,
RA Cohen J., Wincker P.;
RT "Global trends of whole-genome duplications revealed by the ciliate
RT Paramecium tetraurelia.";
RL Nature 444:171-178(2006).
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DR EMBL; CT868036; CAK65063.1; -; Genomic_DNA.
DR RefSeq; XP_001432460.1; XM_001432423.1.
DR AlphaFoldDB; A0C2P6; -.
DR STRING; 5888.A0C2P6; -.
DR EnsemblProtists; CAK65063; CAK65063; GSPATT00034541001.
DR GeneID; 5018245; -.
DR KEGG; ptm:GSPATT00034541001; -.
DR eggNOG; KOG1911; Eukaryota.
DR HOGENOM; CLU_1839036_0_0_1; -.
DR InParanoid; A0C2P6; -.
DR Proteomes; UP000000600; Partially assembled WGS sequence.
DR GO; GO:0005721; C:pericentric heterochromatin; IBA:GO_Central.
DR GO; GO:0003682; F:chromatin binding; IBA:GO_Central.
DR GO; GO:0035064; F:methylated histone binding; IBA:GO_Central.
DR GO; GO:0006325; P:chromatin organization; IBA:GO_Central.
DR GO; GO:0031507; P:heterochromatin formation; IEA:InterPro.
DR GO; GO:0000122; P:negative regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR CDD; cd00024; CD_CSD; 1.
DR Gene3D; 2.40.50.40; -; 1.
DR InterPro; IPR016197; Chromo-like_dom_sf.
DR InterPro; IPR000953; Chromo/chromo_shadow_dom.
DR InterPro; IPR017984; Chromo_dom_subgr.
DR InterPro; IPR023780; Chromo_domain.
DR InterPro; IPR023779; Chromodomain_CS.
DR InterPro; IPR044251; LHP1-like.
DR PANTHER; PTHR47240; CHROMO DOMAIN-CONTAINING PROTEIN LHP1; 1.
DR PANTHER; PTHR47240:SF2; CHROMO DOMAIN-CONTAINING PROTEIN LHP1; 1.
DR Pfam; PF00385; Chromo; 1.
DR PRINTS; PR00504; CHROMODOMAIN.
DR SMART; SM00298; CHROMO; 1.
DR SUPFAM; SSF54160; Chromo domain-like; 1.
DR PROSITE; PS00598; CHROMO_1; 1.
DR PROSITE; PS50013; CHROMO_2; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000000600}.
FT DOMAIN 14..73
FT /note="Chromo"
FT /evidence="ECO:0000259|PROSITE:PS50013"
SQ SEQUENCE 144 AA; 16772 MW; 3CD08C0CBFB7A037 CRC64;
MSASPVSVSS QEEYMVEAIT NKRVKNGRTE YEVKWQGYSE NEKTWEPIEN LQSVMTYVLD
FEQSLKTKPQ EVGEGSYEDG DSADEIIQIR KDNDGQNLLF QVSWKLKNSR APKVSWINQN
SLKMHNPEIL IDYLLKKIKW PNNK
//
