ID   A0D7R2_PARTE            Unreviewed;       984 AA.
AC   A0D7R2;
DT   28-NOV-2006, integrated into UniProtKB/TrEMBL.
DT   28-NOV-2006, sequence version 1.
DT   24-JAN-2024, entry version 76.
DE   SubName: Full=Chromosome undetermined scaffold_40, whole genome shotgun sequence {ECO:0000313|EMBL:CAK79079.1};
GN   ORFNames=GSPATT00014046001 {ECO:0000313|EMBL:CAK79079.1};
OS   Paramecium tetraurelia.
OC   Eukaryota; Sar; Alveolata; Ciliophora; Intramacronucleata;
OC   Oligohymenophorea; Peniculida; Parameciidae; Paramecium.
OX   NCBI_TaxID=5888 {ECO:0000313|EMBL:CAK79079.1, ECO:0000313|Proteomes:UP000000600};
RN   [1] {ECO:0000313|EMBL:CAK79079.1, ECO:0000313|Proteomes:UP000000600}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Stock d4-2 {ECO:0000313|EMBL:CAK79079.1,
RC   ECO:0000313|Proteomes:UP000000600};
RX   PubMed=17086204; DOI=10.1038/nature05230;
RG   Genoscope;
RA   Aury J.-M., Jaillon O., Duret L., Noel B., Jubin C., Porcel B.M.,
RA   Segurens B., Daubin V., Anthouard V., Aiach N., Arnaiz O., Billaut A.,
RA   Beisson J., Blanc I., Bouhouche K., Camara F., Duharcourt S., Guigo R.,
RA   Gogendeau D., Katinka M., Keller A.-M., Kissmehl R., Klotz C., Koll F.,
RA   Le Moue A., Lepere C., Malinsky S., Nowacki M., Nowak J.K., Plattner H.,
RA   Poulain J., Ruiz F., Serrano V., Zagulski M., Dessen P., Betermier M.,
RA   Weissenbach J., Scarpelli C., Schachter V., Sperling L., Meyer E.,
RA   Cohen J., Wincker P.;
RT   "Global trends of whole-genome duplications revealed by the ciliate
RT   Paramecium tetraurelia.";
RL   Nature 444:171-178(2006).
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; CT868319; CAK79079.1; -; Genomic_DNA.
DR   RefSeq; XP_001446476.1; XM_001446439.1.
DR   AlphaFoldDB; A0D7R2; -.
DR   STRING; 5888.A0D7R2; -.
DR   EnsemblProtists; CAK79079; CAK79079; GSPATT00014046001.
DR   GeneID; 5032261; -.
DR   KEGG; ptm:GSPATT00014046001; -.
DR   eggNOG; KOG0151; Eukaryota.
DR   eggNOG; KOG1614; Eukaryota.
DR   HOGENOM; CLU_302945_0_0_1; -.
DR   InParanoid; A0D7R2; -.
DR   Proteomes; UP000000600; Partially assembled WGS sequence.
DR   GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR   GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR   GO; GO:0006396; P:RNA processing; IEA:InterPro.
DR   CDD; cd00590; RRM_SF; 1.
DR   Gene3D; 1.25.40.90; -; 1.
DR   Gene3D; 3.30.70.330; -; 1.
DR   Gene3D; 3.30.230.70; GHMP Kinase, N-terminal domain; 1.
DR   Gene3D; 1.10.10.790; Surp module; 1.
DR   InterPro; IPR006569; CID_dom.
DR   InterPro; IPR008942; ENTH_VHS.
DR   InterPro; IPR001247; ExoRNase_PH_dom1.
DR   InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR   InterPro; IPR027408; PNPase/RNase_PH_dom_sf.
DR   InterPro; IPR035979; RBD_domain_sf.
DR   InterPro; IPR020568; Ribosomal_Su5_D2-typ_SF.
DR   InterPro; IPR000504; RRM_dom.
DR   InterPro; IPR000061; Surp.
DR   InterPro; IPR035967; SWAP/Surp_sf.
DR   PANTHER; PTHR23140; RNA PROCESSING PROTEIN LD23810P; 1.
DR   PANTHER; PTHR23140:SF0; U2 SNRNP-ASSOCIATED SURP MOTIF-CONTAINING PROTEIN; 1.
DR   Pfam; PF04818; CID; 1.
DR   Pfam; PF01138; RNase_PH; 1.
DR   Pfam; PF00076; RRM_1; 1.
DR   Pfam; PF01805; Surp; 1.
DR   SMART; SM00582; RPR; 1.
DR   SMART; SM00648; SWAP; 1.
DR   SUPFAM; SSF48464; ENTH/VHS domain; 1.
DR   SUPFAM; SSF54211; Ribosomal protein S5 domain 2-like; 1.
DR   SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR   SUPFAM; SSF109905; Surp module (SWAP domain); 1.
DR   PROSITE; PS51391; CID; 1.
DR   PROSITE; PS50128; SURP; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000000600};
KW   RNA-binding {ECO:0000256|ARBA:ARBA00022884}.
FT   DOMAIN          156..198
FT                   /note="SURP motif"
FT                   /evidence="ECO:0000259|PROSITE:PS50128"
FT   DOMAIN          272..400
FT                   /note="CID"
FT                   /evidence="ECO:0000259|PROSITE:PS51391"
FT   REGION          651..748
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        651..699
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        713..748
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   984 AA;  116350 MW;  83531FBEE2E2CEF7 CRC64;
     MQANCILKPL QLQPQVRSLI VIQKPLKPLA GMQQNLNEHL NNIKNIIPYQ FVDKSSPHIT
     ICGLTPKITE QSLRLVCAEY GNVVSISLRA YYKDVQAQIV ANVTYENASS AQHAYMELQK
     KVENGFHFQL YYGGPCYQSK SKIVKIKLPN PQIRGIIDKL ARQVVKEGAQ FEQMIKQREI
     NNSKYAFLYL QSEENEYYKW RVYSFQNGDD EKQWKQEPYY FNLNERIYIP PAIEVEEAPS
     FAKKELEKAQ SKCSSIIIIV TTKNKKAQYY VLEDQDRLTL SQMIRELNTQ KHTIGKAMVF
     CIDHQNCPAD LMLILEDSLL NDSIWSMKLA RLYLISDILN NCNQNFKSYI QWCLPKIFSN
     LDQLLPYKEK ILKLLQCWRE QNLFDQKYLK GLELSFLMKE QSIQIESISS QLYKEKLAHV
     DDETLDRICR IKGLCSQGPR DTLIQRLVQH KFYNRANHDV SLEQVSKFVQ VYRYIVEKVF
     VIYTIIKSKD QQTIISSQKQ SFTTQIQMMQ EFLKLLQKRY KNIISRDGEE IDAVDERIYE
     FNKHIEIQRA ERNLYLNIDG KDLTEEDIRT IDDKKVQVVT NYELTYLQPK PPLPPPPTDP
     IEIEVQQYRD ILFQSGLYDP FKIEEFSKSK RAQLVKADQL KKERERQLLL KQQQEQRERE
     KERERERERE REKEREKERE KEREREKERE REKERERQRH HNRNNKRSSS SSGSDKRNQK
     KRNMIRNIIR EDPDQEAIQE KRKLKTKRDE QNIIKHKKYN YKIYLFIKPL KNFEFVLEQL
     TLGKRIDGRD PLQLRMIQSH FGPQITGAVE LSLGETSVSR MSPNPIRPSE GFLKFHLDLQ
     VLRDTGYMHN PIKLDMEIEK YIEKVIKGSK ALDTESLCIL SGKNVWSIDV NVALINNDGN
     LLDAMYLCCI FSQQHFRRPQ VSVSLQGVKV EVEKRLVPLS IHHIPLSLTQ AILELNEQTI
     LLQDSCLEEE DSEWKNHLWC KHLQ
//